RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MIGA2Q7L4E1 593 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 SLC7A3Q8WY07 619 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 TMEM206Q9H813 350 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 TEX33O43247 280 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 CHGBP05060 677 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 MXI1P50539 228 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 CACNB3P54284 484 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 CFAP57Q96MR6 1250 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
CACNB1-206ENST00000539338 TBK1Q9UHD2 729 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
CACNB1-206ENST00000539338 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 CEP152O94986 1710 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 DYNLT1P63172 113 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 EPC1Q9H2F5 836 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
CACNB1-206ENST00000539338 FOXO4P98177 505 aa15.71■□□□□ 0.1
CACNB1-206ENST00000539338 FOXP4Q8IVH2 680 aaPredicted RBP15.71■□□□□ 0.1
CACNB1-206ENST00000539338 OTUD5Q96G74 571 aa15.71■□□□□ 0.1
CACNB1-206ENST00000539338 NUF2Q9BZD4 464 aa15.71■□□□□ 0.1
CACNB1-206ENST00000539338 ALKQ9UM73 1620 aa15.71■□□□□ 0.1
CACNB1-206ENST00000539338 IL9RQ01113 521 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 APOL6Q9BWW8 343 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 ANAPC5Q9UJX4 755 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 PP2D1A8MPX8 630 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 INO80B-WBP1J3KQ70 363 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 TMED2Q15363 201 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 EXOC8Q8IYI6 725 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
CACNB1-206ENST00000539338 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
CACNB1-206ENST00000539338 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 NFIXQ14938 502 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 SNCBQ16143 134 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 GSG1L2A8MUP6 293 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 INHBAP08476 426 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 LMNB2Q03252 620 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 PPP2R5AQ15172 486 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 DEFB115Q30KQ5 88 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 CFAP61Q8NHU2 1237 aa15.7■□□□□ 0.1
CACNB1-206ENST00000539338 DCP1AQ9NPI6 582 aaPredicted RBP15.7■□□□□ 0.1
CACNB1-206ENST00000539338 PALMO75781 387 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 KRT1P04264 644 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 NR1D1P20393 614 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 C10orf76Q5T2E6 689 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 SLC17A8Q8NDX2 589 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 CELF1Q92879 486 aaKnown RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 TRIM11Q96F44 468 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 RFX7Q2KHR2 1363 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 NRKQ7Z2Y5 1582 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 LRRC53A6NM62 1247 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 DR1Q01658 176 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 SCYL1Q96KG9 808 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 TMEM260Q9NX78 707 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 TFAMQ00059 246 aaKnown RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 MTERF2Q49AM1 385 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 GSPT2Q8IYD1 628 aaKnown RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 MIPOL1Q8TD10 442 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 TCP11Q8WWU5 503 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 MIS12Q9H081 205 aa15.69■□□□□ 0.1
CACNB1-206ENST00000539338 DNAJC17Q9NVM6 304 aaKnown RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
CACNB1-206ENST00000539338 E9PMD0 336 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 EIF2AK2P19525 551 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 GUCY1A2P33402 732 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CC2D1AQ6P1N0 951 aaPredicted RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 GCNAQ96QF7 691 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 FMO2Q99518 471 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CLTCQ00610 1675 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 A6NJR5 290 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CASQ2O14958 399 aaPredicted RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 FGGP02679 453 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 PHLDB3Q6NSJ2 640 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 MAP7D3Q8IWC1 876 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 WHAMMQ8TF30 809 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 PLSCR1O15162 318 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 CD58P19256 250 aa15.68■□□□□ 0.1
CACNB1-206ENST00000539338 RNASELQ05823 741 aaKnown RBP15.68■□□□□ 0.1
CACNB1-206ENST00000539338 GFPT1Q06210 699 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms