RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 FIBPO43427 364 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 PAK2Q13177 524 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 GRIK4Q16099 956 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 ZDHHC14Q8IZN3 488 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 CASP10Q92851 521 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 INPP4AQ96PE3 977 aaPredicted RBP13.93□□□□□ -0.18
YBX3-207ENST00000539204 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 HINFPQ9BQA5 517 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 SENP7Q9BQF6 1050 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 TYW1Q9NV66 732 aaKnown RBP13.93□□□□□ -0.18
YBX3-207ENST00000539204 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
YBX3-207ENST00000539204 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 HIDE1A8MVS5 230 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 M0QZ92 97 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 ZBTB5O15062 677 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 MTHFRP42898 656 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 SARSP49591 514 aaKnown RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 TRAF1Q13077 416 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 MARCH8Q5T0T0 291 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 CWF19L1Q69YN2 538 aaKnown RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 COLGALT1Q8NBJ5 622 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 GIMAP8Q8ND71 665 aaPredicted RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 MRPS27Q92552 414 aaKnown RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 ERAP1Q9NZ08 941 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 TELO2Q9Y4R8 837 aa13.92□□□□□ -0.18
YBX3-207ENST00000539204 KMT2BQ9UMN6 2715 aaPredicted RBP13.92□□□□□ -0.18
YBX3-207ENST00000539204 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 NPR3P17342 541 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 TCF7P36402 384 aaPredicted RBP13.91□□□□□ -0.18
YBX3-207ENST00000539204 NT5C2P49902 561 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 IGBP1P78318 339 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 MCMDC2Q4G0Z9 681 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 ATAT1Q5SQI0 421 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 FAM102BQ5T8I3 360 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
YBX3-207ENST00000539204 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
YBX3-207ENST00000539204 DLL3Q9NYJ7 618 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 TRPV2Q9Y5S1 764 aa13.91□□□□□ -0.18
YBX3-207ENST00000539204 PPP1R11O60927 126 aaPredicted RBP13.9□□□□□ -0.18
YBX3-207ENST00000539204 MARK3P27448 753 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 KRT17Q04695 432 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 TMEM62Q0P6H9 643 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 NFX1Q12986 1120 aaKnown RBP13.9□□□□□ -0.18
YBX3-207ENST00000539204 SEMA3FQ13275 785 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 TMC7Q7Z402 723 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 SEPT1Q8WYJ6 367 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 GLG1Q92896 1179 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
YBX3-207ENST00000539204 TMX1Q9H3N1 280 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 CYP26B1Q9NR63 512 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
YBX3-207ENST00000539204 PLXNA4Q9HCM2 1894 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 FRYLO94915 3013 aa13.9□□□□□ -0.18
YBX3-207ENST00000539204 ZMYM6O95789 1325 aa13.9□□□□□ -0.19
YBX3-207ENST00000539204 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.19
YBX3-207ENST00000539204 ACACBO00763 2458 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 STK25O00506 426 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 LAG3P18627 525 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 NLRX1Q86UT6 975 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 STAG2Q8N3U4 1231 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 NME8Q8N427 588 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 RUBCNQ92622 972 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
YBX3-207ENST00000539204 EVI5LQ96CN4 794 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 SMARCAD1Q9H4L7 1026 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 CWH43Q9H720 699 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 HCFC2Q9Y5Z7 792 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 R4GN57 208 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 KIAA1671Q9BY89 1806 aa13.89□□□□□ -0.19
YBX3-207ENST00000539204 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 GSTTP1A0A1W2PQM5 241 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 DENND3A2RUS2 1198 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 ZNF213O14771 459 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 WEE2P0C1S8 567 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 INSRRP14616 1297 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 TDGQ13569 410 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 RSPO4Q2I0M5 234 aaPredicted RBP13.88□□□□□ -0.19
YBX3-207ENST00000539204 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 SIX5Q8N196 739 aa13.88□□□□□ -0.19
YBX3-207ENST00000539204 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
YBX3-207ENST00000539204 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
YBX3-207ENST00000539204 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
YBX3-207ENST00000539204 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
YBX3-207ENST00000539204 ZBTB10Q96DT7 871 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms