RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 NBR1Q14596 966 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 GPNMBQ14956 572 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 C9orf50Q5SZB4 431 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
PRPF19-203ENST00000539180 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 C16orf59Q7L2K0 433 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 TRAPPC12Q8WVT3 735 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 BBXQ8WY36 941 aaPredicted RBP16.9■□□□□ 0.3
PRPF19-203ENST00000539180 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 IL23AQ9NPF7 189 aa16.9■□□□□ 0.3
PRPF19-203ENST00000539180 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
PRPF19-203ENST00000539180 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 EVPLQ92817 2033 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 STBD1O95210 358 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 SELPP16109 830 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 RFC2P35250 354 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
PRPF19-203ENST00000539180 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
PRPF19-203ENST00000539180 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 ZBTB10Q96DT7 871 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRPF19-203ENST00000539180 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.89■□□□□ 0.29
PRPF19-203ENST00000539180 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 LOXHD1Q8IVV2 1947 aa16.89■□□□□ 0.29
PRPF19-203ENST00000539180 GBF1Q92538 1859 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 LAMA3Q16787 3333 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
PRPF19-203ENST00000539180 C22orf31O95567 290 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 CXCL10P02778 98 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 PFKMP08237 780 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 ATP2B1P20020 1258 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 PDCP20941 246 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 SYT1P21579 422 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 IGBP1P78318 339 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 MGAT3Q09327 533 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 EPHA7Q15375 998 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 ZNF174Q15697 407 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 TMEM240Q5SV17 173 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 RASIP1Q5U651 963 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
PRPF19-203ENST00000539180 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
PRPF19-203ENST00000539180 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
PRPF19-203ENST00000539180 WRAP73Q9P2S5 460 aaPredicted RBP16.88■□□□□ 0.29
PRPF19-203ENST00000539180 POTEMA6NI47 508 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 NBNO60934 754 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 PARNO95453 639 aaKnown RBP16.87■□□□□ 0.29
PRPF19-203ENST00000539180 SHHQ15465 462 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 TARBP2Q15633 366 aaKnown RBP16.87■□□□□ 0.29
PRPF19-203ENST00000539180 ZNF484Q5JVG2 852 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 FAM26DQ5JW98 314 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 MTHFD1LQ6UB35 978 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 LINC01465Q8N7H1 131 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 BANK1Q8NDB2 785 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
PRPF19-203ENST00000539180 SMIM35A0A1B0GVV1 85 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
PRPF19-203ENST00000539180 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
PRPF19-203ENST00000539180 ACRP10323 421 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 THPOP40225 353 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 TXKP42681 527 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 QARSP47897 775 aaKnown RBP16.86■□□□□ 0.29
PRPF19-203ENST00000539180 PSMC5P62195 406 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 RESTQ13127 1097 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 CKAP2LQ8IYA6 745 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 NEK9Q8TD19 979 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 LXNQ9BS40 222 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 CEP131Q9UPN4 1083 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
PRPF19-203ENST00000539180 MARCH6O60337 910 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 P4HBP07237 508 aaKnown RBP16.85■□□□□ 0.29
PRPF19-203ENST00000539180 CTSHP09668 335 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 XKR3Q5GH77 459 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 ZNF365Q70YC5 407 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 ANO5Q75V66 913 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 C4orf19Q8IY42 314 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 DNAJB3Q8WWF6 145 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 HERVK_113Q902F9 699 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
PRPF19-203ENST00000539180 NIFKQ9BYG3 293 aaKnown RBP16.85■□□□□ 0.29
PRPF19-203ENST00000539180 TMEM150BA6NC51 233 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RBAK-RBAKDNI3L0D1 243 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 LAD1O00515 517 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 LYPLA2O95372 231 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 KLRC1P26715 233 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 PRPHP41219 470 aa16.84■□□□□ 0.29
PRPF19-203ENST00000539180 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms