RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
CLPB-210ENST00000539148 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
CLPB-210ENST00000539148 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
CLPB-210ENST00000539148 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
CLPB-210ENST00000539148 GABBR1Q9UBS5 961 aa11.42□□□□□ -0.58
CLPB-210ENST00000539148 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
CLPB-210ENST00000539148 IGSF9BQ9UPX0 1349 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 FAM237AA0A1B0GTK4 181 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 RRN3P2A6NIE6 340 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 CCDC85CA6NKD9 419 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 POLR2DO15514 142 aaKnown RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 GAS2O43903 313 aaKnown RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 HBP1O60381 514 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 SLITRK3O94933 977 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 OATP04181 439 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 LGALS2P05162 132 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 MYL3P08590 195 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 PFKFB1P16118 471 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 CYP4A11Q02928 519 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 TRIM32Q13049 653 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 IL17AQ16552 155 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 UTP14CQ5TAP6 766 aaKnown RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 SHC4Q6S5L8 630 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 SV2BQ7L1I2 683 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 RETREG2Q8NC44 543 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 LARP4BQ92615 738 aaKnown RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 COPS5Q92905 334 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 TRIM44Q96DX7 344 aaPredicted RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 DYDC2Q96IM9 177 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 EPSTI1Q96J88 318 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 ZNF333Q96JL9 665 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 UIMC1Q96RL1 719 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 TMEM63CQ9P1W3 806 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 DBR1Q9UK59 544 aaKnown RBP11.41□□□□□ -0.58
CLPB-210ENST00000539148 KIAA1024Q9UPX6 916 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 ARID2Q68CP9 1835 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 COL1A2P08123 1366 aa11.41□□□□□ -0.58
CLPB-210ENST00000539148 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 EML1O00423 815 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 DNM1LO00429 736 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 MAGEB2O15479 319 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 SORBS3O60504 671 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 SLC34A2O95436 690 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 EYA4O95677 639 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 PGK1P00558 417 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 F2P00734 622 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 TFRCP02786 760 aaKnown RBP11.4□□□□□ -0.58
CLPB-210ENST00000539148 SLFN14P0C7P3 912 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 YWHABP31946 246 aaKnown RBP11.4□□□□□ -0.58
CLPB-210ENST00000539148 RFC5P40937 340 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 DNM2P50570 870 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.58
CLPB-210ENST00000539148 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
CLPB-210ENST00000539148 ZNF484Q5JVG2 852 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.58
CLPB-210ENST00000539148 PDILTQ8N807 584 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 C7orf31Q8N865 590 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 CNNM3Q8NE01 707 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 ATP8B4Q8TF62 1192 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 SLC7A3Q8WY07 619 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 GJA10Q969M2 543 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 DEFB118Q96PH6 123 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 TNMDQ9H2S6 317 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 HPSEQ9Y251 543 aa11.4□□□□□ -0.58
CLPB-210ENST00000539148 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 ADAMTS4O75173 837 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 MED24O75448 989 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 ZNF202O95125 648 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 SMC2O95347 1197 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 SGPL1O95470 568 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 KRT18P05783 430 aaKnown RBP11.39□□□□□ -0.59
CLPB-210ENST00000539148 SPATA31C1P0DKV0 1188 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 PLCG1P19174 1290 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 TMOD1P28289 359 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 CDC25AP30304 524 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 ABCD1P33897 745 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 NDUFA8P51970 172 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 PURAQ00577 322 aaKnown RBP11.39□□□□□ -0.59
CLPB-210ENST00000539148 CDC42EP1Q00587 391 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 PRKCEQ02156 737 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 MLLT1Q03111 559 aaPredicted RBP11.39□□□□□ -0.59
CLPB-210ENST00000539148 CTTNQ14247 550 aaKnown RBP11.39□□□□□ -0.59
CLPB-210ENST00000539148 LRRC41Q15345 812 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 KCNA10Q16322 511 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 TMEM119Q4V9L6 283 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 SPECC1Q5M775 1068 aa11.39□□□□□ -0.59
CLPB-210ENST00000539148 GJC2Q5T442 439 aaPredicted RBP11.39□□□□□ -0.59
CLPB-210ENST00000539148 CCDC60Q8IWA6 550 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms