RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SLFN12Q8IYM2 578 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
CPNE8-203ENST00000538596 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
CPNE8-203ENST00000538596 LRRC37AA6NMS7 1700 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 EML1O00423 815 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 MSH4O15457 936 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 SIPA1L1O43166 1804 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 IRAK1P51617 712 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 EMBQ6PCB8 327 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
CPNE8-203ENST00000538596 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 SH3GL2Q99962 352 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 KCNK3O14649 394 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 OPLAHO14841 1288 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 RPA1P27694 616 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 CASKIN2Q8WXE0 1202 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 MKL1Q969V6 931 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 AMNQ9BXJ7 453 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 ASTN1O14525 1302 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 RAD51CO43502 376 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 PPFIA4O75335 1185 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 GCNT3O95395 438 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 NDUFB10O96000 172 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 PPARDQ03181 441 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 EPM2AIP1Q7L775 607 aaPredicted RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 NAP1L4Q99733 375 aaKnown RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 LUC7LQ9NQ29 371 aaKnown RBP13.11□□□□□ -0.31
CPNE8-203ENST00000538596 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
CPNE8-203ENST00000538596 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 FBXO11Q86XK2 927 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 NYAP2Q9P242 653 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 CHMP2AO43633 222 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 HSF2BPO75031 334 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 NR3C1P04150 777 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 AP3B2Q13367 1082 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ZDHHC15Q96MV8 337 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 RASSF4Q9H2L5 321 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ATAD5Q96QE3 1844 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 GNGT1P63211 74 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 UBXN2AP68543 259 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 EPHA7Q15375 998 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 Q4G0T1 1027 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ZC2HC1CQ53FD0 456 aaPredicted RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ALKBH5Q6P6C2 394 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 USP38Q8NB14 1042 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 EIF2AK1Q9BQI3 630 aaKnown RBP13.1□□□□□ -0.31
CPNE8-203ENST00000538596 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
CPNE8-203ENST00000538596 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 CCT5P48643 541 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 COG2Q14746 738 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 GLE1Q53GS7 698 aaKnown RBP13.09□□□□□ -0.31
CPNE8-203ENST00000538596 PIK3R5Q8WYR1 880 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 RUBCNQ92622 972 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 SLC35C1Q96A29 364 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 A0A1W2PRG0 241 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 GOLGA8KD6RF30 607 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 CEP104O60308 925 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 GH2P01242 217 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 ZNF76P36508 570 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 SREBF1P36956 1147 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 PPFIA1Q13136 1202 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms