RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 WDR11Q9BZH6 1224 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 UNC45AQ9H3U1 944 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 SCAF8Q9UPN6 1271 aaKnown RBP15.43■□□□□ 0.06
LIMK1-208ENST00000538333 CAPN6Q9Y6Q1 641 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 MYH11P35749 1972 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 RPTORQ8N122 1335 aa15.43■□□□□ 0.06
LIMK1-208ENST00000538333 SRGAP2O75044 1071 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 AKAP3O75969 853 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 KCNA1Q09470 495 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 SFMBT2Q5VUG0 894 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
LIMK1-208ENST00000538333 TRIM58Q8NG06 486 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 FIZ1Q96SL8 496 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 PIM2Q9P1W9 311 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 COL20A1Q9P218 1284 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 ARMCX3Q9UH62 379 aaPredicted RBP15.42■□□□□ 0.06
LIMK1-208ENST00000538333 ZMYM2Q9UBW7 1377 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 EIF3DO15371 548 aaKnown RBP eCLIP15.42■□□□□ 0.06
LIMK1-208ENST00000538333 TGFB1I1O43294 461 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 GCNT3O95395 438 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 EGFRP00533 1210 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 NR3C1P04150 777 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 SERPING1P05155 500 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 GHRHRQ02643 423 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 GFPT1Q06210 699 aaPredicted RBP15.42■□□□□ 0.06
LIMK1-208ENST00000538333 EPHA7Q15375 998 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 CLEC4DQ8WXI8 215 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 MMS19Q96T76 1030 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 MXRA8Q9BRK3 442 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 FUT8Q9BYC5 575 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 UBXN6Q9BZV1 441 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
LIMK1-208ENST00000538333 SFI1A8K8P3 1242 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 WDR46O15213 610 aaKnown RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 ITGB5P18084 799 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 MAGEA1P43355 309 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 ZNF131P52739 623 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 ZNF280AP59817 542 aaPredicted RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 GABPB1Q06547 395 aaPredicted RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 LONRF2Q1L5Z9 754 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 SLC9C1Q4G0N8 1177 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 ST7Q9NRC1 585 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 AIPL1Q9NZN9 384 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 SALL4Q9UJQ4 1053 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 NFIBO00712 420 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 FAM13AO94988 1023 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 RHOXF2BP0C7M4 288 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 BCRP11274 1271 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 TGFB2P61812 414 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 NFIL3Q16649 462 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 TDRD12Q587J7 1177 aaKnown RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 BEND6Q5SZJ8 279 aaPredicted RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
LIMK1-208ENST00000538333 LPAR1Q92633 364 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 NACC1Q96RE7 527 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 RIT2Q99578 217 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 RHOXF2Q9BQY4 288 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 TEKT3Q9BXF9 490 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 TAOK3Q9H2K8 898 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 JRKLQ9Y4A0 524 aa15.41■□□□□ 0.06
LIMK1-208ENST00000538333 TACC1O75410 805 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 MOCS3O95396 460 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
LIMK1-208ENST00000538333 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
LIMK1-208ENST00000538333 EPS15P42566 896 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 CASP4P49662 377 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 KIAA1683Q9H0B3 1180 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 KCND2Q9NZV8 630 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 SEL1LQ9UBV2 794 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 PARP14Q460N5 1801 aa15.4■□□□□ 0.06
LIMK1-208ENST00000538333 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
LIMK1-208ENST00000538333 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
LIMK1-208ENST00000538333 VSNL1P62760 191 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 DMTNQ08495 405 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 IL31RAQ8NI17 732 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 SLC35C1Q96A29 364 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 LXNQ9BS40 222 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
LIMK1-208ENST00000538333 SNX12Q9UMY4 172 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 NFKBIEO00221 500 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
LIMK1-208ENST00000538333 MAP2K7O14733 419 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 ZNF185O15231 689 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 CLIC2O15247 247 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 ACTN1P12814 892 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 SLC9A1P19634 815 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 PON1P27169 355 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 CKAP4Q07065 602 aaKnown RBP15.39■□□□□ 0.05
LIMK1-208ENST00000538333 NIPA1Q7RTP0 329 aa15.39■□□□□ 0.05
LIMK1-208ENST00000538333 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms