RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TOP6BLQ8N6T0 577 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 MIGA1Q8NAN2 632 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 FAM13CQ8NE31 585 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 RIN3Q8TB24 985 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 RUFY2Q8WXA3 655 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 APPBP2Q92624 585 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 PRMT6Q96LA8 375 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-208ENST00000538266 CRNKL1Q9BZJ0 848 aaKnown RBP5.13□□□□□ -1.59
SNHG1-208ENST00000538266 TDRD3Q9H7E2 651 aaKnown RBP5.13□□□□□ -1.59
SNHG1-208ENST00000538266 EHMT1Q9H9B1 1298 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 AATFQ9NY61 560 aaKnown RBP eCLIP5.13□□□□□ -1.591e-323■■■□□ 16.4
SNHG1-208ENST00000538266 GAKO14976 1311 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 ZNF532Q9HCE3 1301 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 ECM29Q5VYK3 1845 aa5.13□□□□□ -1.59
SNHG1-208ENST00000538266 MYO5AQ9Y4I1 1855 aaKnown RBP5.13□□□□□ -1.59
SNHG1-208ENST00000538266 SRCAPQ6ZRS2 3230 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 GPR75-ASB3A0A0A6YYF3 556 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 PRR19A6NJB7 356 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 SLC22A31A6NKX4 558 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 TCP10L2B9ZVM9 353 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 CYP26A1O43174 497 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 TOMM70O94826 608 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 MBD4O95243 580 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 ATE1O95260 518 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 TGFB1P01137 390 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 APPP05067 770 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 GSPT1P15170 499 aaKnown RBP5.12□□□□□ -1.59
SNHG1-208ENST00000538266 NF2P35240 595 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 YARSP54577 528 aaKnown RBP5.12□□□□□ -1.59
SNHG1-208ENST00000538266 PICALMQ13492 652 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 APOBEC3HQ6NTF7 200 aaKnown RBP5.12□□□□□ -1.59
SNHG1-208ENST00000538266 SKAP1Q86WV1 359 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 AMOTL1Q8IY63 956 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 TEX11Q8IYF3 940 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 SMC1BQ8NDV3 1235 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 GPRASP2Q96D09 838 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 SPATA32Q96LK8 384 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 DPH2Q9BQC3 489 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-208ENST00000538266 CAPN10Q9HC96 672 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 LRRC4CQ9HCJ2 640 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 GINM1Q9NU53 330 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 USP40Q9NVE5 1235 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 ZNF70Q9UC06 446 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-208ENST00000538266 KLHL3Q9UH77 587 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 RNF112Q9ULX5 631 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 PPP2R3BQ9Y5P8 575 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 PITPNM2Q9BZ72 1349 aa5.12□□□□□ -1.59
SNHG1-208ENST00000538266 TCRBV5S4A2TA0A5A2 114 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CDC45O75419 566 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 SLITRK5O94991 958 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 EOMESO95936 686 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 GNAT2P19087 354 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CACNB3P54284 484 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 TCP10Q12799 353 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 NMIQ13287 307 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 MCMDC2Q4G0Z9 681 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ZMYM1Q5SVZ6 1142 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 FKBP1CQ5VVH2 108 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 FBXW10Q5XX13 1052 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CDC42EP5Q6NZY7 148 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 LETMD1Q6P1Q0 360 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CWC27Q6UX04 472 aaKnown RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ADGRA1Q86SQ6 560 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CDH24Q86UP0 819 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 RASGRP4Q8TDF6 673 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 SH3RF3Q8TEJ3 882 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ZNF384Q8TF68 577 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 HOOK2Q96ED9 719 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ZBED3Q96IU2 234 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 MIPEPQ99797 713 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 NACAP1Q9BZK3 213 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 PUS7LQ9H0K6 701 aaKnown RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 DEFB129Q9H1M3 183 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ARMT1Q9H993 441 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 HELLSQ9NRZ9 838 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 TPX2Q9ULW0 747 aaKnown RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 CEP131Q9UPN4 1083 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 EFR3BQ9Y2G0 817 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 PCDHAC2Q9Y5I4 1007 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 SLC4A4Q9Y6R1 1079 aa5.11□□□□□ -1.59
SNHG1-208ENST00000538266 ASTN2O75129 1339 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-208ENST00000538266 A0A0D9SFI3 127 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 ADM5C9JUS6 153 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 M0R2C6 588 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 GPAA1O43292 621 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 ENTPD3O75355 529 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 WDHD1O75717 1129 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-208ENST00000538266 CHGBP05060 677 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 HLA-DOAP06340 250 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 FLT1P17948 1338 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 CHMLP26374 656 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 GRIK1P39086 918 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 GJA8P48165 433 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 TDO2P48775 406 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 RHBDL3P58872 404 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 DYNLL1P63167 89 aaKnown RBP5.1□□□□□ -1.59
SNHG1-208ENST00000538266 FSTL1Q12841 308 aa5.1□□□□□ -1.59
SNHG1-208ENST00000538266 GNL2Q13823 731 aaKnown RBP5.1□□□□□ -1.59
SNHG1-208ENST00000538266 COL9A2Q14055 689 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-208ENST00000538266 RASA3Q14644 834 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms