RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 AZIN2Q96A70 460 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TRIM47Q96LD4 638 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 CCDC113Q9H0I3 377 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 USP20Q9Y2K6 914 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 TMA7Q9Y2S6 64 aaKnown RBP11.61□□□□□ -0.55
RTN3-208ENST00000537981 NALCNQ8IZF0 1738 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.61□□□□□ -0.55
RTN3-208ENST00000537981 TECPR2O15040 1411 aa11.61□□□□□ -0.55
RTN3-208ENST00000537981 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 RPN1P04843 607 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 KCNA3P22001 575 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 CD151P48509 253 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 SCARF1Q14162 830 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 SEPT2Q15019 361 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 EPS8L3Q8TE67 593 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 FBF1Q8TES7 1133 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 SNRNP27Q8WVK2 155 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 SLC35B4Q969S0 331 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 DUSP9Q99956 384 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 COPRSQ9NQ92 184 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 KCNK3O14649 394 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 GPR37O15354 613 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 MAGEB3O15480 346 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 ATP9AO75110 1047 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 ZNF24P17028 368 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 PSMC4P43686 418 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 ZNF658Q5TYW1 1059 aaPredicted RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 DNAJC1Q96KC8 554 aaKnown RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 MYD88Q99836 296 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 TMEM59LQ9UK28 342 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 USP15Q9Y4E8 981 aaPredicted RBP11.6□□□□□ -0.55
RTN3-208ENST00000537981 PXDNQ92626 1479 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
RTN3-208ENST00000537981 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 ZNF213O14771 459 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 GH1P01241 217 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 ACADSP16219 412 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 DNM2P50570 870 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 MUM1Q2TAK8 710 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 TCERG1LQ5VWI1 586 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 RFWD3Q6PCD5 774 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 RRAGAQ7L523 313 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 ADSSL1Q8N142 457 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 IGDCC4Q8TDY8 1250 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 CENPTQ96BT3 561 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 LRRC45Q96CN5 670 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 ZNF333Q96JL9 665 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 NOX5Q96PH1 765 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 DMAP1Q9NPF5 467 aaPredicted RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 CHMP2BQ9UQN3 213 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 BCL9O00512 1426 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 BDNFP23560 247 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 EPHB2P29323 1055 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 DYNC1I2Q13409 638 aaKnown RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 SDCCAG8Q86SQ7 713 aaPredicted RBP11.59□□□□□ -0.55
RTN3-208ENST00000537981 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 LRRC15Q8TF66 581 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 ABCC12Q96J65 1359 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 CARD9Q9H257 536 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 HAO1Q9UJM8 370 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
RTN3-208ENST00000537981 PP2D1A8MPX8 630 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 H7C1D1 291 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 PDLIM1O00151 329 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 ERFP50548 548 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 ZNF131P52739 623 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 GCKRQ14397 625 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 RASA3Q14644 834 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 SEPT14Q6ZU15 432 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 KBTBD2Q8IY47 623 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 CNOT6LQ96LI5 555 aaKnown RBP11.58□□□□□ -0.56
RTN3-208ENST00000537981 LZTS2Q9BRK4 669 aa11.58□□□□□ -0.56
RTN3-208ENST00000537981 KRT23Q9C075 422 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms