RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 KIAA0355O15063 1070 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 COBLO75128 1261 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 BCAR3O75815 825 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-207ENST00000537965 AKR1A1P14550 325 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 PLCD1P51178 756 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TLE2Q04725 743 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 FPGSQ05932 587 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 GABPAQ06546 454 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 C9orf50Q5SZB4 431 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 SLC9C2Q5TAH2 1124 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 PRR23CQ6ZRP0 262 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TMEM57Q8N5G2 664 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 UBASH3BQ8TF42 649 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 MYLIPQ8WY64 445 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 FERMT2Q96AC1 680 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 EAF2Q96CJ1 260 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TOX2Q96NM4 488 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 UBL7Q96S82 380 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TCF12Q99081 682 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 MMP19Q99542 508 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 RIOK1Q9BRS2 568 aaKnown RBP6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 CEP41Q9BYV8 373 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 SOX17Q9H6I2 414 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-207ENST00000537965 LIN7BQ9HAP6 207 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 SPC25Q9HBM1 224 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 XPNPEP3Q9NQH7 507 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 ATP8A2Q9NTI2 1148 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TMEM39AQ9NV64 488 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 CNPY2Q9Y2B0 182 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 TMX2Q9Y320 296 aa6.39□□□□□ -1.39
SNHG1-207ENST00000537965 A0A096LPE4 126 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 TRIM43BA6NCK2 446 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 CCER2I3L3R5 266 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 EIF1AYO14602 144 aaKnown RBP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 STAT3P40763 770 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 ICA1Q05084 483 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 PPIGQ13427 754 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 PRAMEF19Q5SWL8 479 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 ANO1Q5XXA6 986 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 AACSQ86V21 672 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 RIOX2Q8IUF8 465 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 PCSK9Q8NBP7 692 aaKnown RBP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 TRIM43Q96BQ3 446 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 VCPKMTQ9H867 229 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 KANSL2Q9H9L4 492 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 DCP1AQ9NPI6 582 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-207ENST00000537965 STARD7Q9NQZ5 370 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 DCTN4Q9UJW0 460 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 FAM184BQ9ULE4 1060 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 ADAMTS5Q9UNA0 930 aa6.38□□□□□ -1.39
SNHG1-207ENST00000537965 ROBO3Q96MS0 1386 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ELP1O95163 1332 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 SYNGAP1Q96PV0 1343 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 A0A1W2PQ45 241 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 A0A1W2PQY0 241 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 A0A1W2PRG0 241 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TLR3O15455 904 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 PQBP1O60828 265 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 HMMRO75330 724 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TIMP1P01033 207 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 IFIT2P09913 472 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 PDE6AP16499 860 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 GRIA4P48058 902 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 NLRP12P59046 1061 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 KCNA1Q09470 495 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TMEM132BQ14DG7 1078 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ZNF792Q3KQV3 632 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ANKRD33Q7Z3H0 272 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ITPRIPQ8IWB1 547 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TMEM199Q8N511 208 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 SLC44A5Q8NCS7 719 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 CCDC74AQ96AQ1 378 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ATG4CQ96DT6 458 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 KIF1BPQ96EK5 621 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 DDX11Q96FC9 970 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 FAM46AQ96IP4 442 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 GLT1D1Q96MS3 346 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TRAIPQ9BWF2 469 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 SEZ6LQ9BYH1 1024 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 MTIF3Q9H2K0 278 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 CLEC4MQ9H2X3 399 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 TTYH1Q9H313 450 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 CHMP4BQ9H444 224 aaKnown RBP6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ZNF576Q9H609 170 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 ANTXR1Q9H6X2 564 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
SNHG1-207ENST00000537965 CTDP1Q9Y5B0 961 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms