RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 RXFP3Q9NSD7 469 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 LAMA4Q16363 1823 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 MINDY4BA8MYZ0 360 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 KCNK5O95279 499 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 GNAI3P08754 354 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 SCG2P13521 617 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 ADD2P35612 726 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 SP2Q02086 613 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 POLA2Q14181 598 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 CSRP2Q16527 193 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 FAM102BQ5T8I3 360 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 C19orf48Q6RUI8 117 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 CCDC149Q6ZUS6 474 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 TMC7Q7Z402 723 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 MRPL43Q8N983 215 aaKnown RBP11.21□□□□□ -0.61
CPSF7-217ENST00000537162 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 SPATA33Q96N06 139 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
CPSF7-217ENST00000537162 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
CPSF7-217ENST00000537162 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-217ENST00000537162 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.62
CPSF7-217ENST00000537162 TMEM8BA6NDV4 472 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
CPSF7-217ENST00000537162 LGALS2P05162 132 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 RARSP54136 660 aaKnown RBP11.2□□□□□ -0.62
CPSF7-217ENST00000537162 STARD6P59095 220 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 FOXC1Q12948 553 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-217ENST00000537162 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 SYDE2Q5VT97 1194 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 LAIR1Q6GTX8 287 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 PDZD3Q86UT5 571 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 TELO2Q9Y4R8 837 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
CPSF7-217ENST00000537162 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 GIPC1O14908 333 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 LRP3O75074 770 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 BCAR3O75815 825 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 GGPS1O95749 300 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 RETP07949 1114 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 STXBP2Q15833 593 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 CELF3Q5SZQ8 465 aaKnown RBP11.19□□□□□ -0.62
CPSF7-217ENST00000537162 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 GPR149Q86SP6 731 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 TRIM50Q86XT4 487 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-217ENST00000537162 NEDD1Q8NHV4 660 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 SLC22A17Q8WUG5 538 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.623e-7■■■■□ 21.6
CPSF7-217ENST00000537162 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 DNAJC2Q99543 621 aaKnown RBP11.19□□□□□ -0.62
CPSF7-217ENST00000537162 GPR20Q99678 358 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 MYH7P12883 1935 aa11.19□□□□□ -0.62
CPSF7-217ENST00000537162 MYH15Q9Y2K3 1946 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 B4DLN1 442 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 MGEA5O60502 916 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 GNAI2P04899 355 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
CPSF7-217ENST00000537162 SMC1AQ14683 1233 aaKnown RBP11.18□□□□□ -0.62
CPSF7-217ENST00000537162 SF3A2Q15428 464 aaKnown RBP11.18□□□□□ -0.62
CPSF7-217ENST00000537162 LRRC55Q6ZSA7 311 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 MYADMQ96S97 322 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
CPSF7-217ENST00000537162 DZANK1Q9NVP4 752 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 ANKFY1Q9P2R3 1169 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
CPSF7-217ENST00000537162 DOCK8Q8NF50 2099 aa11.18□□□□□ -0.62
CPSF7-217ENST00000537162 FRMPD2Q68DX3 1309 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 KANSL1LA0AUZ9 987 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 GSG1L2A8MUP6 293 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 NMT2O60551 498 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 TDGF1P13385 188 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 EIF2AK2P19525 551 aaKnown RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 CD72P21854 359 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 CA8P35219 290 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 SNW1Q13573 536 aaKnown RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 CCDC96Q2M329 555 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 LARP1BQ659C4 914 aaKnown RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 BTNL9Q6UXG8 535 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 SYTL5Q8TDW5 730 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 DNAJB3Q8WWF6 145 aa11.17□□□□□ -0.62
CPSF7-217ENST00000537162 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
CPSF7-217ENST00000537162 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms