RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 COL1A2P08123 1366 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 A0A1W2PPC1 479 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 MBLAC1A4D2B0 266 aaPredicted RBP23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 OR52Z1P0C646 297 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 IQCF3P0C7M6 154 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 SELPP16109 830 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 PRKCEQ02156 737 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 EPHA7Q15375 998 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 TRIM71Q2Q1W2 868 aaKnown RBP23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 ZNF484Q5JVG2 852 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 MARCH8Q5T0T0 291 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 TAF2Q6P1X5 1199 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 NRBP2Q9NSY0 501 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 PCDHB6Q9Y5E3 794 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 RANBP2P49792 3224 aaKnown RBP23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 ZNF862O60290 1169 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 CAND2O75155 1236 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 OATP04181 439 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 RFC2P35250 354 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 THPOP40225 353 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 LRRC8DQ7L1W4 858 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 BRAPQ7Z569 592 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 TDHQ8IZJ6 230 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 BANK1Q8NDB2 785 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 TRAPPC12Q8WVT3 735 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 IL23AQ9NPF7 189 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 CEP131Q9UPN4 1083 aa23.59■■□□□ 1.37
LPCAT3-204ENST00000536797 DKC1O60832 514 aaKnown RBP eCLIP23.58■■□□□ 1.36
LPCAT3-204ENST00000536797 P4HBP07237 508 aaKnown RBP23.58■■□□□ 1.36
LPCAT3-204ENST00000536797 PSMC5P62195 406 aa23.58■■□□□ 1.36
LPCAT3-204ENST00000536797 RPUSD2Q8IZ73 545 aaKnown RBP23.58■■□□□ 1.36
LPCAT3-204ENST00000536797 SCN5AQ14524 2016 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 PARNO95453 639 aaKnown RBP23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 QARSP47897 775 aaKnown RBP23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 EPHB4P54760 987 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 ZNF618Q5T7W0 954 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 RUFY4Q6ZNE9 571 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 RSPH3Q86UC2 560 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 FERMT3Q86UX7 667 aa23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.57■■□□□ 1.36
LPCAT3-204ENST00000536797 LAD1O00515 517 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 STX6O43752 255 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 RPLP2P05387 115 aaKnown RBP23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 ACRP10323 421 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 PTGDRQ13258 359 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 XKR3Q5GH77 459 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 PSRC1Q6PGN9 363 aaPredicted RBP23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 MTHFD1LQ6UB35 978 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 C4orf32Q8N8J7 132 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 PCDHA2Q9Y5H9 948 aa23.56■■□□□ 1.36
LPCAT3-204ENST00000536797 RSPH10B2B2RC85 870 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 ZBTB42B2RXF5 422 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 PFKMP08237 780 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 RSPH10BP0C881 870 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 KLRC1P26715 233 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 TECP42680 631 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 TMEM266Q2M3C6 531 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 RPAINQ86UA6 219 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 NEK9Q8TD19 979 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 ZBTB10Q96DT7 871 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 DYDC2Q96IM9 177 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.55■■□□□ 1.367e-6■□□□□ 9.4
LPCAT3-204ENST00000536797 LXNQ9BS40 222 aa23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 SEPT9Q9UHD8 586 aaPredicted RBP23.55■■□□□ 1.36
LPCAT3-204ENST00000536797 SMIM35A0A1B0GVV1 85 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 POTEMA6NI47 508 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 CTSHP09668 335 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 SHHQ15465 462 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 C9orf50Q5SZB4 431 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 DNAJB3Q8WWF6 145 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 EIF2AK1Q9BQI3 630 aaKnown RBP23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 FAM49AQ9H0Q0 323 aaPredicted RBP23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 RGL1Q9NZL6 768 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 MTMR6Q9Y217 621 aa23.54■■□□□ 1.36
LPCAT3-204ENST00000536797 CYP4A11Q02928 519 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 HABP4Q5JVS0 413 aaKnown RBP23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 TMEM240Q5SV17 173 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 TRAF7Q6Q0C0 670 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 ZNF365Q70YC5 407 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 C16orf59Q7L2K0 433 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 SPRYD3Q8NCJ5 442 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 NIFKQ9BYG3 293 aaKnown RBP23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 ZSWIM4Q9H7M6 989 aa23.53■■□□□ 1.36
LPCAT3-204ENST00000536797 DDX11L8A8MPP1 907 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 MAGEB2O15479 319 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 C22orf31O95567 290 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 FGBP02675 491 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 PDIA4P13667 645 aaKnown RBP23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 FXR2P51116 673 aaKnown RBP eCLIP23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 CTTNQ14247 550 aaKnown RBP23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 TPH2Q8IWU9 490 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 C4orf19Q8IY42 314 aa23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 FTOQ9C0B1 505 aaKnown RBP eCLIP23.52■■□□□ 1.36
LPCAT3-204ENST00000536797 EVPLQ92817 2033 aa23.51■■□□□ 1.35
LPCAT3-204ENST00000536797 SLITRK3O94933 977 aa23.51■■□□□ 1.35
LPCAT3-204ENST00000536797 STBD1O95210 358 aa23.51■■□□□ 1.35
LPCAT3-204ENST00000536797 PRPHP41219 470 aa23.51■■□□□ 1.35
LPCAT3-204ENST00000536797 RESTQ13127 1097 aa23.51■■□□□ 1.35
LPCAT3-204ENST00000536797 MTERF2Q49AM1 385 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms