RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 AKNAD1Q5T1N1 836 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 AGBL3Q8NEM8 1001 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 ASB11Q8WXH4 323 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 KLHL6Q8WZ60 621 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 ZNF669Q96BR6 464 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-203ENST00000536742 FMNL2Q96PY5 1086 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 DBNDD1Q9H9R9 158 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 CDH23Q9H251 3354 aa8.54□□□□□ -1.04
CCDC60-203ENST00000536742 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 ANKRD34BA5PLL1 514 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 FAM86C2PA6NEL3 165 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 C9IYK1 514 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 DDAH1O94760 285 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 A1BGP04217 495 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 PSMC4P43686 418 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 SERINC3Q13530 473 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 HEATR6Q6AI08 1181 aaKnown RBP8.53□□□□□ -1.04
CCDC60-203ENST00000536742 KIAA1211LQ6NV74 962 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 TMPRSS7Q7RTY8 843 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 PLD6Q8N2A8 252 aaKnown RBP8.53□□□□□ -1.04
CCDC60-203ENST00000536742 SYTL5Q8TDW5 730 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-203ENST00000536742 PPM1EQ8WY54 764 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 HAUS7Q99871 368 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 CCDC113Q9H0I3 377 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 C11orf49Q9H6J7 331 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 PAK6Q9NQU5 681 aaPredicted RBP8.53□□□□□ -1.04
CCDC60-203ENST00000536742 WHRNQ9P202 907 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
CCDC60-203ENST00000536742 MSRB2Q9Y3D2 182 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 MYPNQ86TC9 1320 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 ADGRA2Q96PE1 1338 aa8.53□□□□□ -1.04
CCDC60-203ENST00000536742 RTL9Q8NET4 1388 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 SIGLEC6O43699 453 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 ITGA4P13612 1032 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 NMIQ13287 307 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 EIF4A2Q14240 407 aaKnown RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 KCTD2Q14681 263 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 NFE2L2Q16236 605 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 C6orf15Q6UXA7 325 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 DAGLBQ8NCG7 672 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 DIS3LQ8TF46 1054 aaKnown RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 FBXL21Q9UKT6 434 aa8.52□□□□□ -1.05
CCDC60-203ENST00000536742 TCF20Q9UGU0 1960 aaKnown RBP8.52□□□□□ -1.05
CCDC60-203ENST00000536742 DDX60Q8IY21 1712 aaKnown RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 HEG1Q9ULI3 1381 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 CHD8Q9HCK8 2581 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ECE2O60344 883 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 CD247P20963 164 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 TDRD10Q5VZ19 366 aaKnown RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ZNF655Q8N720 491 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ST13P5Q8NFI4 369 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 BCL7CQ8WUZ0 217 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 CLMNQ96JQ2 1002 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 KLHL25Q9H0H3 589 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 OSBPL2Q9H1P3 480 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ZCCHC17Q9NP64 241 aaKnown RBP8.51□□□□□ -1.05
CCDC60-203ENST00000536742 FHOD1Q9Y613 1164 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 U3KQE9 123 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ZSWIM8A7E2V4 1837 aa8.51□□□□□ -1.05
CCDC60-203ENST00000536742 ROCK2O75116 1388 aaKnown RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 PI4K2BG5E9Z4 385 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 LRRN2O75325 713 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 PPM1BO75688 479 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 GJB6O95452 261 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 ENDOUP21128 410 aaKnown RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 PLCL1Q15111 1095 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 NFXL1Q6ZNB6 911 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 TSPYL5Q86VY4 417 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 CELF2-AS1Q8N7Q2 184 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 HSPA12BQ96MM6 686 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 EYA3Q99504 573 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 APBA2Q99767 749 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 SEMA3GQ9NS98 782 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 PCDHB10Q9UN67 800 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 DIS3Q9Y2L1 958 aaKnown RBP8.5□□□□□ -1.05
CCDC60-203ENST00000536742 CFAP54Q96N23 3096 aa8.5□□□□□ -1.05
CCDC60-203ENST00000536742 SHOXO15266 292 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 RNMTO43148 476 aaKnown RBP8.49□□□□□ -1.05
CCDC60-203ENST00000536742 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 GTF2A2P52657 109 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 RASGRF1Q13972 1273 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 NOL9Q5SY16 702 aaKnown RBP8.49□□□□□ -1.05
CCDC60-203ENST00000536742 CDKAL1Q5VV42 579 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 ANKRD13AQ8IZ07 590 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 ASIC4Q96FT7 647 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms