RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 H2AFYO75367 372 aaKnown RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 MAPKAPK2P49137 400 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 HERVK_113P62684 666 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 ADCY1Q08828 1119 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 MYO1HQ8N1T3 1032 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 TTLL11Q8NHH1 800 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 LMBR1Q8WVP7 490 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 JPH3Q8WXH2 748 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 TSPAN17Q96FV3 270 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 TOE1Q96GM8 510 aaKnown RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 ZNF496Q96IT1 587 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 TUBGCP5Q96RT8 1024 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 RTFDC1Q9BY42 306 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 ANO3Q9BYT9 981 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 POFUT1Q9H488 388 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 DTLQ9NZJ0 730 aa7.13□□□□□ -1.27
PRKDC-208ENST00000536710 USP36Q9P275 1121 aaKnown RBP7.13□□□□□ -1.27
PRKDC-208ENST00000536710 UBA6A0AVT1 1052 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-208ENST00000536710 PRAMEF22A3QJZ6 481 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 HYAL3O43820 417 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-208ENST00000536710 ADAM23O75077 832 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 CLEC2LP0C7M8 214 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 ATF3P18847 181 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 STAT5AP42229 794 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 GP2P55259 537 aaKnown RBP7.12□□□□□ -1.27
PRKDC-208ENST00000536710 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 TIGD7Q6NT04 549 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-208ENST00000536710 ESPNLQ6ZVH7 1005 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 PHYKPLQ8IUZ5 450 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 FERMT2Q96AC1 680 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 E2F7Q96AV8 911 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 ACAP3Q96P50 834 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 SLC13A1Q9BZW2 595 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 UCKL1Q9NWZ5 548 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 KLHL14Q9P2G3 628 aa7.12□□□□□ -1.27
PRKDC-208ENST00000536710 RBP3P10745 1247 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 RECQLP46063 649 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-208ENST00000536710 GPR3P46089 330 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 DBPQ10586 325 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-208ENST00000536710 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 PRAMEF9Q5VWM5 478 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 ETV3LQ6ZN32 361 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 CXorf67Q86X51 503 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-208ENST00000536710 CILP2Q8IUL8 1156 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 FAM126BQ8IXS8 530 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 RHOBTB2Q9BYZ6 727 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 PDGFDQ9GZP0 370 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-208ENST00000536710 SEMA4AQ9H3S1 761 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 CCM2LQ9NUG4 571 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-208ENST00000536710 DNAJC28Q9NX36 388 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 INVSQ9Y283 1065 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 ASB1Q9Y576 335 aa7.11□□□□□ -1.27
PRKDC-208ENST00000536710 KLHL33A6NCF5 533 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 ABLIM1O14639 778 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 PRC1O43663 620 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 ABLIM3O94929 683 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 PF4V1P10720 104 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 AOAHP28039 575 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 MC4RP32245 332 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 CT83Q5H943 113 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 EFCAB2Q5VUJ9 269 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 OLFML2BQ68BL8 750 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 TMC6Q7Z403 805 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 C14orf80Q86SX3 495 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 MYL10Q9BUA6 226 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 QRSL1Q9H0R6 528 aaKnown RBP7.1□□□□□ -1.27
PRKDC-208ENST00000536710 SLC39A2Q9NP94 309 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 EDARQ9UNE0 448 aa7.1□□□□□ -1.27
PRKDC-208ENST00000536710 ST20-MTHFSA0A0A6YYL1 179 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 FZD9O00144 591 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 LRG1P02750 347 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 ENPP1P22413 925 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 NKX3-2P78367 333 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 SLC6A3Q01959 620 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 ODF1Q14990 250 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 MLC1Q15049 377 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 UGT8Q16880 541 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 TOR2AQ5JU69 321 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 CD276Q5ZPR3 534 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 TEPPQ6URK8 271 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 CD300LDQ6UXZ3 194 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 ATG4DQ86TL0 474 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 ZC3H18Q86VM9 953 aaKnown RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 CPA6Q8N4T0 437 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 EAF2Q96CJ1 260 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 CAMKK2Q96RR4 588 aa7.09□□□□□ -1.27
PRKDC-208ENST00000536710 GEMIN8Q9NWZ8 242 aaKnown RBP7.09□□□□□ -1.27
PRKDC-208ENST00000536710 TRIM75PA6NK02 468 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA12O60330 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PRPF6O94906 941 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms