RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 MYH9P35579 1960 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 MFAP3LO75121 409 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TADA3O75528 432 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TPM1P09493 284 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CTGFP29279 349 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CASQ1P31415 396 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 PDE4DQ08499 809 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RBL2Q08999 1139 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 GRB14Q14449 540 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 KCNB1Q14721 858 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CNGA4Q8IV77 575 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 FBXO16Q8IX29 292 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RGL1Q9NZL6 768 aa14.36□□□□□ -0.11
CDK5RAP3-202ENST00000536708 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 URI1O94763 535 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CCDC175P0C221 793 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 KCNA2P16389 499 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CCT6AP40227 531 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 SP4Q02446 784 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 PAK1Q13153 545 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 PPP2R5CQ13362 524 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TERF2Q15554 542 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 STXBP2Q15833 593 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 KRT79Q5XKE5 535 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 LRRN4CLQ8ND94 238 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 GPRASP2Q96D09 838 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 ARHGAP39Q9C0H5 1083 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 BLZF1Q9H2G9 400 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 ZFYVE28Q9HCC9 887 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CTNND2Q9UQB3 1225 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CCNE2O96020 404 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 SPATA31C1P0DKV0 1188 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 GNG11P61952 73 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CAP1Q01518 475 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 SP2Q02086 613 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TRIM14Q14142 442 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 KRT31Q15323 416 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TMEM119Q4V9L6 283 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 TEKT3Q9BXF9 490 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 MAF1Q9H063 256 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 WRAP73Q9P2S5 460 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CA12O43570 354 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 MAPK4P31152 587 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 VEGFBP49765 207 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 ZNF792Q3KQV3 632 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RAD9BQ6WBX8 426 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 UBXN4Q92575 508 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CALML4Q96GE6 196 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 WDR24Q96S15 920 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 RIT2Q99578 217 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 EIF2AK1Q9BQI3 630 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 CUEDC2Q9H467 287 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 MAGEF1Q9HAY2 307 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 MRFAP1Q9Y605 127 aa14.34□□□□□ -0.11
CDK5RAP3-202ENST00000536708 E9PMD0 336 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ARIH2O95376 493 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 GYPCP04921 128 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 COPB1P53618 953 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 CTTNQ14247 550 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TCP11X2Q5H9J9 407 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ARMCX2Q7L311 632 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 NLRX1Q86UT6 975 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MNS1Q8NEH6 495 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 NPLOC4Q8TAT6 608 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 NELFBQ8WX92 580 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 DYDC2Q96IM9 177 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 KIAA1024Q9UPX6 916 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MYH11P35749 1972 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 SPATA31C2B4DYI2 1134 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 PSMC6P62333 389 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 MCM6Q14566 821 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 GNPTABQ3T906 1256 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ARHGAP29Q52LW3 1261 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ABRAQ8N0Z2 381 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 CARD6Q9BX69 1037 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 PDGFCQ9NRA1 345 aa14.33□□□□□ -0.12
CDK5RAP3-202ENST00000536708 ZNF446Q9NWS9 450 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms