RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 RALGAPA2Q2PPJ7 1873 aa16.96■□□□□ 0.31
UBC-204ENST00000536661 XIRP2A4UGR9 3374 aa16.96■□□□□ 0.31
UBC-204ENST00000536661 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.95■□□□□ 0.3
UBC-204ENST00000536661 M0R2N6 131 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 PFKFB2O60825 505 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 MRPS6P82932 125 aaKnown RBP16.95■□□□□ 0.3
UBC-204ENST00000536661 LPIN1Q14693 890 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 ZNF746Q6NUN9 644 aaPredicted RBP16.95■□□□□ 0.3
UBC-204ENST00000536661 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 BLIDQ8IZY5 108 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 DAGLBQ8NCG7 672 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 TBCKQ8TEA7 893 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 ATP8B4Q8TF62 1192 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 APBB2Q92870 758 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
UBC-204ENST00000536661 ZNF302Q9NR11 478 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 MUC3AQ02505 3323 aa16.95■□□□□ 0.3
UBC-204ENST00000536661 MSH4O15457 936 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 HBP1O60381 514 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 CDKL5O76039 1030 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 SEC24BO95487 1268 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 ATP4AP20648 1035 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 USP11P51784 963 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 KRT76Q01546 638 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 CCDC85BQ15834 202 aaPredicted RBP16.94■□□□□ 0.3
UBC-204ENST00000536661 FBXO47Q5MNV8 452 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 SWSAP1Q6NVH7 229 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
UBC-204ENST00000536661 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 KCNJ14Q9UNX9 436 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
UBC-204ENST00000536661 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
UBC-204ENST00000536661 COL1A2P08123 1366 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 TTC3P53804 2025 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 LINC01553A4QN01 128 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 LARGE1O95461 756 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 TDP2O95551 362 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 RPLP2P05387 115 aaKnown RBP16.93■□□□□ 0.3
UBC-204ENST00000536661 HTRA4P83105 476 aaPredicted RBP16.93■□□□□ 0.3
UBC-204ENST00000536661 TMEM62Q0P6H9 643 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 FAM177A1Q8N128 213 aaPredicted RBP16.93■□□□□ 0.3
UBC-204ENST00000536661 MICALL1Q8N3F8 863 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 INSL6Q9Y581 213 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 MAFBQ9Y5Q3 323 aaPredicted RBP16.93■□□□□ 0.3
UBC-204ENST00000536661 TRPV2Q9Y5S1 764 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 IGSF9BQ9UPX0 1349 aa16.93■□□□□ 0.3
UBC-204ENST00000536661 KIAA1671Q9BY89 1806 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 ZBTB42B2RXF5 422 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 PSAPP07602 524 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 KLRC1P26715 233 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 IER5Q5VY09 327 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 KRT40Q6A162 431 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 TSHZ1Q6ZSZ6 1077 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 GJA10Q969M2 543 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 TOP1MTQ969P6 601 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 PHF20Q9BVI0 1012 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 AGO3Q9H9G7 860 aaKnown RBP16.92■□□□□ 0.3
UBC-204ENST00000536661 GABBR1Q9UBS5 961 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 MTUS1Q9ULD2 1270 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 SAMM50Q9Y512 469 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 MTCH2Q9Y6C9 303 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 ATG2AQ2TAZ0 1938 aa16.92■□□□□ 0.3
UBC-204ENST00000536661 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 WDR64B1ANS9 1081 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 M0QZ92 97 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 LPXNO60711 386 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 GAS7O60861 476 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 UPP2O95045 317 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 POU3F3P20264 500 aaPredicted RBP16.91■□□□□ 0.3
UBC-204ENST00000536661 ERVK-21P61565 698 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 GRB10Q13322 594 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■■■■■ 29.7
UBC-204ENST00000536661 ME3Q16798 604 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 Q4G0T1 1027 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 ZNF484Q5JVG2 852 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 TRMT1LQ7Z2T5 733 aaKnown RBP16.91■□□□□ 0.3
UBC-204ENST00000536661 KRT25Q7Z3Z0 450 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 CKAP2LQ8IYA6 745 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
UBC-204ENST00000536661 GDPD5Q8WTR4 605 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 TGS1Q96RS0 853 aaKnown RBP16.91■□□□□ 0.3
UBC-204ENST00000536661 RIT2Q99578 217 aa16.91■□□□□ 0.3
UBC-204ENST00000536661 CYP3A7-CYP3A51PA0A087WV96 503 aa16.9■□□□□ 0.3
UBC-204ENST00000536661 CHMP2AO43633 222 aa16.9■□□□□ 0.3
UBC-204ENST00000536661 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
UBC-204ENST00000536661 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
UBC-204ENST00000536661 CYP3A7P24462 503 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms