RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 ORC2Q13416 577 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-214ENST00000536344 CAGE1Q8TC20 777 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 CENPHQ9H3R5 247 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 RWDD2AQ9UIY3 292 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 FEM1BQ9UK73 627 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 VCAM1P19320 739 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 KIAA0895Q8NCT3 520 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 GIMAP8Q8ND71 665 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-214ENST00000536344 TRIM47Q96LD4 638 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 WDR18Q9BV38 432 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 ZHX3Q9H4I2 956 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 ZHX2Q9Y6X8 837 aa23.52■■□□□ 1.36
TRIM3-214ENST00000536344 RCCD1A6NED2 376 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 HERVK_113P62684 666 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 FILIP1LQ4L180 1135 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 CCDC122Q5T0U0 273 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 C7orf25Q9BPX7 421 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 SPON1Q9HCB6 807 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 RGL1Q9NZL6 768 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 ZNF536O15090 1300 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 CTNND1O60716 968 aaKnown RBP23.51■■□□□ 1.35
TRIM3-214ENST00000536344 HMGCS2P54868 508 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 PPP2R5AQ15172 486 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 AENQ8WTP8 325 aaKnown RBP23.51■■□□□ 1.35
TRIM3-214ENST00000536344 N4BP2L2Q92802 583 aaPredicted RBP23.51■■□□□ 1.35
TRIM3-214ENST00000536344 RPAP3Q9H6T3 665 aaPredicted RBP23.51■■□□□ 1.35
TRIM3-214ENST00000536344 COL20A1Q9P218 1284 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 ABCB11O95342 1321 aa23.51■■□□□ 1.35
TRIM3-214ENST00000536344 TRMT1LQ7Z2T5 733 aaKnown RBP23.5■■□□□ 1.35
TRIM3-214ENST00000536344 KIRREL3Q8IZU9 778 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 BCAS3Q9H6U6 928 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 DDX39AO00148 427 aaKnown RBP23.5■■□□□ 1.35
TRIM3-214ENST00000536344 EML1O00423 815 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 MEFVO15553 781 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-214ENST00000536344 PEX10O60683 326 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 MATR3P43243 847 aaKnown RBP eCLIP23.5■■□□□ 1.35
TRIM3-214ENST00000536344 SETQ01105 290 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-214ENST00000536344 FGFBP2Q9BYJ0 223 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 LACRTQ9GZZ8 138 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 CUEDC2Q9H467 287 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 SMARCAL1Q9NZC9 954 aa23.5■■□□□ 1.35
TRIM3-214ENST00000536344 TARSL2A2RTX5 802 aaKnown RBP23.49■■□□□ 1.35
TRIM3-214ENST00000536344 KCNJ18B7U540 433 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 LMNB1P20700 586 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 KCNJ12Q14500 433 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 RPAINQ86UA6 219 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 CATSPER3Q86XQ3 398 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 IRF2BP1Q8IU81 584 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 RNF181Q9P0P0 153 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 CYP3A7-CYP3A51PA0A087WV96 503 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 ZBTB39O15060 712 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 FOSP01100 380 aaPredicted RBP23.49■■□□□ 1.35
TRIM3-214ENST00000536344 CYP3A7P24462 503 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 ELF1P32519 619 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 AMPD3Q01432 767 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 GUCY1A3Q02108 690 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 APBA1Q02410 837 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 SPIRE1Q08AE8 756 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 PABPC4Q13310 644 aaKnown RBP eCLIP23.49■■□□□ 1.35
TRIM3-214ENST00000536344 KCNB1Q14721 858 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 TMEM119Q4V9L6 283 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 ANKRD40Q6AI12 368 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 FAM160B2Q86V87 743 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 LRRC1Q9BTT6 524 aa23.49■■□□□ 1.35
TRIM3-214ENST00000536344 KIAA0754O94854 1291 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 KRT14P02533 472 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 RNF187Q5TA31 235 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-214ENST00000536344 IL31RAQ8NI17 732 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 MCM8Q9UJA3 840 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 FAM184BQ9ULE4 1060 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 MCM3P25205 808 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 SEC24CP53992 1094 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 PAPD7Q5XG87 772 aaKnown RBP23.48■■□□□ 1.35
TRIM3-214ENST00000536344 CCDC51Q96ER9 411 aa23.48■■□□□ 1.35
TRIM3-214ENST00000536344 MRPL11Q9Y3B7 192 aaKnown RBP23.48■■□□□ 1.35
TRIM3-214ENST00000536344 FRMD3A2A2Y4 597 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 PSMA7O14818 248 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 FSBPO95073 299 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 ARP10275 920 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 PAX7P23759 505 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 CNKSR2Q8WXI2 1034 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 MIEF2Q96C03 454 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 ATG4CQ96DT6 458 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 JADE2Q9NQC1 790 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 SYNPO2Q9UMS6 1093 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 CTTNQ14247 550 aaKnown RBP23.47■■□□□ 1.35
TRIM3-214ENST00000536344 TCP11X2Q5H9J9 407 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 CTAGE1Q96RT6 745 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 KIAA1683Q9H0B3 1180 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 PICK1Q9NRD5 415 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 EHD2Q9NZN4 543 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 STK17AQ9UEE5 414 aa23.47■■□□□ 1.35
TRIM3-214ENST00000536344 IGLV3-22A0A075B6J6 115 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 TTC26A0AVF1 554 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 PLA2G4BP0C869 781 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 PTPRAP18433 802 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 GPBP1Q86WP2 473 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 CSGALNACT2Q8N6G5 542 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 PIGOQ8TEQ8 1089 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 MBOAT7Q96N66 472 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms