RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 CRAMP1Q96RY5 1269 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 DNM3Q9UQ16 869 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 TAF1LQ8IZX4 1826 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 POLD1P28340 1107 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 ECHS1P30084 290 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 CACNB3P54284 484 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 EPHA7Q15375 998 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 DCAF17Q5H9S7 520 aaPredicted RBP20.46■□□□□ 0.87
CHPF-203ENST00000535926 GJB7Q6PEY0 223 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 SIAH1Q8IUQ4 282 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 SCFD2Q8WU76 684 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 TAF4BQ92750 862 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 SUGT1Q9Y2Z0 365 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 RPA1P27694 616 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 AP1M1Q9BXS5 423 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 IKZF4Q9H2S9 585 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 SIX2Q9NPC8 291 aa20.46■□□□□ 0.87
CHPF-203ENST00000535926 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 XRCC5P13010 732 aaKnown RBP20.45■□□□□ 0.86
CHPF-203ENST00000535926 GUCY1A3Q02108 690 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 CYP4A11Q02928 519 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 C10orf76Q5T2E6 689 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 DDX42Q86XP3 938 aaKnown RBP eCLIP20.45■□□□□ 0.86
CHPF-203ENST00000535926 CD302Q8IX05 232 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 SP8Q8IXZ3 490 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 CYP2W1Q8TAV3 490 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 GLT8D2Q9H1C3 349 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 PDXKO00764 312 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 CLIC2O15247 247 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 CEP104O60308 925 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 ADRA2BP18089 450 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 TNNC1P63316 161 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 TTC31Q49AM3 519 aaPredicted RBP20.45■□□□□ 0.86
CHPF-203ENST00000535926 WHAMMQ8TF30 809 aa20.45■□□□□ 0.86
CHPF-203ENST00000535926 A0A087WUV0 522 aaPredicted RBP20.44■□□□□ 0.86
CHPF-203ENST00000535926 PPEF1O14829 653 aaPredicted RBP20.44■□□□□ 0.86
CHPF-203ENST00000535926 SLC26A4O43511 780 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 ZEB2O60315 1214 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 TCP10Q12799 353 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 TCERG1LQ5VWI1 586 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 KDM7AQ6ZMT4 941 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 TADA2BQ86TJ2 420 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 TPCN2Q8NHX9 752 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 MKL1Q969V6 931 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 SLC35C1Q96A29 364 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 ZC3H12CQ9C0D7 883 aaKnown RBP20.44■□□□□ 0.86
CHPF-203ENST00000535926 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
CHPF-203ENST00000535926 NENFQ9UMX5 172 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 BZW2Q9Y6E2 419 aaKnown RBP20.44■□□□□ 0.86
CHPF-203ENST00000535926 ASTN1O14525 1302 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 SFI1A8K8P3 1242 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 CES2O00748 559 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 MOXD1Q6UVY6 613 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 RUSC1Q9BVN2 902 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 ISCUQ9H1K1 167 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 C10orf71Q711Q0 1435 aa20.44■□□□□ 0.86
CHPF-203ENST00000535926 NR3C1P04150 777 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 HSPA9P38646 679 aaKnown RBP20.43■□□□□ 0.86
CHPF-203ENST00000535926 PRKCIP41743 596 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 USH1GQ495M9 461 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 Q4G0T1 1027 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 SLC30A10Q6XR72 485 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 ACTRT1Q8TDG2 376 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 CCDC17Q96LX7 622 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 KCNQ5Q9NR82 932 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 PLAAQ9Y263 795 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 KLRG2A4D1S0 409 aaPredicted RBP20.43■□□□□ 0.86
CHPF-203ENST00000535926 DDTLA6NHG4 134 aaPredicted RBP20.43■□□□□ 0.86
CHPF-203ENST00000535926 JAM2P57087 298 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 AP3B2Q13367 1082 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 EMC10Q5UCC4 262 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 PBKQ96KB5 322 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 NEUROG2Q9H2A3 272 aa20.43■□□□□ 0.86
CHPF-203ENST00000535926 POLRMTO00411 1230 aaKnown RBP20.42■□□□□ 0.86
CHPF-203ENST00000535926 DDX3XO00571 662 aaKnown RBP eCLIP20.42■□□□□ 0.861e-64■■■■■ 35.7
CHPF-203ENST00000535926 NDUFAB1O14561 156 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 MSH4O15457 936 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 SART1O43290 800 aaKnown RBP20.42■□□□□ 0.86
CHPF-203ENST00000535926 CALUO43852 315 aaPredicted RBP20.42■□□□□ 0.86
CHPF-203ENST00000535926 LIG3P49916 1009 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 MICALL1Q8N3F8 863 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 TEKT1Q969V4 418 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 DDX47Q9H0S4 455 aaKnown RBP20.42■□□□□ 0.86
CHPF-203ENST00000535926 RGL1Q9NZL6 768 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 USP21Q9UK80 565 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 PCDHB13Q9Y5F0 798 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 EML1O00423 815 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 CLSTN1O94985 981 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 ITGA4P13612 1032 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 LSP1P33241 339 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 HLTFQ14527 1009 aaKnown RBP eCLIP20.42■□□□□ 0.86
CHPF-203ENST00000535926 HHIPL2Q6UWX4 724 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 ERMNQ8TAM6 284 aa20.42■□□□□ 0.86
CHPF-203ENST00000535926 DCAF4Q8WV16 495 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms