RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-215ENST00000534307 TPCN1Q9ULQ1 816 aa15.97■□□□□ 0.15
SF3B2-215ENST00000534307 PCDHA4Q9UN74 947 aa15.97■□□□□ 0.15
SF3B2-215ENST00000534307 DDX39AO00148 427 aaKnown RBP15.96■□□□□ 0.15
SF3B2-215ENST00000534307 CPLX1O14810 134 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 PFKFB2O60825 505 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 NLRP5P59047 1200 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 PRR16Q569H4 304 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 ZNF746Q6NUN9 644 aaPredicted RBP15.96■□□□□ 0.15
SF3B2-215ENST00000534307 SPRED2Q7Z698 418 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 ZNF577Q9BSK1 485 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 C11orf16Q9NQ32 467 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 TBC1D22BQ9NU19 505 aa15.96■□□□□ 0.15
SF3B2-215ENST00000534307 STK36Q9NRP7 1315 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.95■□□□□ 0.14
SF3B2-215ENST00000534307 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 ZBTB42B2RXF5 422 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 ATP4AP20648 1035 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 USP11P51784 963 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 AK2P54819 239 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 IGBP1P78318 339 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 AAK1Q2M2I8 961 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
SF3B2-215ENST00000534307 POTEBQ6S5H4 581 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 ATP8B4Q8TF62 1192 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 TRAPPC12Q8WVT3 735 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 DNAJB3Q8WWF6 145 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 APBB2Q92870 758 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 RAD9AQ99638 391 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 IFIH1Q9BYX4 1025 aaKnown RBP15.95■□□□□ 0.14
SF3B2-215ENST00000534307 TRPC6Q9Y210 931 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 PCDHA2Q9Y5H9 948 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 WDR81Q562E7 1941 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 COL4A6Q14031 1691 aa15.95■□□□□ 0.14
SF3B2-215ENST00000534307 USP34Q70CQ2 3546 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 MSH4O15457 936 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 CTDNEP1O95476 244 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 SEC24BO95487 1268 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 RPLP2P05387 115 aaKnown RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 POU3F3P20264 500 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 HTRA4P83105 476 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 LPIN1Q14693 890 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 TMEM31Q5JXX7 168 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 FBXO47Q5MNV8 452 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 GALNT17Q6IS24 598 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 RSPH3Q86UC2 560 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 SMAP1Q8IYB5 467 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 BLIDQ8IZY5 108 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 TBCKQ8TEA7 893 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 KHSRPQ92945 711 aaKnown RBP eCLIP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 TNPO1Q92973 898 aaKnown RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 CERS4Q9HA82 394 aa15.94■□□□□ 0.14
SF3B2-215ENST00000534307 MAFBQ9Y5Q3 323 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-215ENST00000534307 CYP3A7-CYP3A51PA0A087WV96 503 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 SMIM35A0A1B0GVV1 85 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 LINC01553A4QN01 128 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 RFXAPO00287 272 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 BACH1O14867 736 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 LPXNO60711 386 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 CDKL5O76039 1030 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 AMHP03971 560 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 GHRP10912 638 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 CYP3A7P24462 503 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 MRPS6P82932 125 aaKnown RBP15.93■□□□□ 0.14
SF3B2-215ENST00000534307 KRT76Q01546 638 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 ANKRD1Q15327 319 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 FAM160B1Q5W0V3 765 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 SWSAP1Q6NVH7 229 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 MIS18BP1Q6P0N0 1132 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 PDXDC2PQ6P474 469 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 MTHFD1LQ6UB35 978 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 SP7Q8TDD2 431 aaPredicted RBP15.93■□□□□ 0.14
SF3B2-215ENST00000534307 SLC5A5Q92911 643 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 TOP1MTQ969P6 601 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 MBOAT7Q96N66 472 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 ZBED2Q9BTP6 218 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 PHF20Q9BVI0 1012 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 C22orf23Q9BZE7 217 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 FAM49AQ9H0Q0 323 aaPredicted RBP15.93■□□□□ 0.14
SF3B2-215ENST00000534307 SLKQ9H2G2 1235 aaPredicted RBP15.93■□□□□ 0.14
SF3B2-215ENST00000534307 ZNF302Q9NR11 478 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 CDY2AQ9Y6F7 541 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 C5orf42Q9H799 3197 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 MYH9P35579 1960 aaKnown RBP15.93■□□□□ 0.14
SF3B2-215ENST00000534307 IGSF9BQ9UPX0 1349 aa15.93■□□□□ 0.14
SF3B2-215ENST00000534307 COL1A2P08123 1366 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 HBP1O60381 514 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 SKIV2LQ15477 1246 aaKnown RBP15.92■□□□□ 0.14
SF3B2-215ENST00000534307 Q4G0T1 1027 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 FAM117BQ6P1L5 589 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 ARNTL2Q8WYA1 636 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 RIT2Q99578 217 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 AGO3Q9H9G7 860 aaKnown RBP15.92■□□□□ 0.14
SF3B2-215ENST00000534307 INSL6Q9Y581 213 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 PCDHA10Q9Y5I2 948 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 MTCH2Q9Y6C9 303 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 SQORQ9Y6N5 450 aa15.92■□□□□ 0.14
SF3B2-215ENST00000534307 KDM3AQ9Y4C1 1321 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms