RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
UBXN1-217ENST00000534176 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
UBXN1-217ENST00000534176 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-217ENST00000534176 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
UBXN1-217ENST00000534176 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
UBXN1-217ENST00000534176 TLL1O43897 1013 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 ST18O60284 1047 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 CTDNEP1O95476 244 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 RABEP1Q15276 862 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBXN1-217ENST00000534176 MARCH8Q5T0T0 291 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 CCDC60Q8IWA6 550 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-217ENST00000534176 NSUN7Q8NE18 718 aaKnown RBP17.45■□□□□ 0.38
UBXN1-217ENST00000534176 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 FTHL17Q9BXU8 183 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 IFIH1Q9BYX4 1025 aaKnown RBP17.45■□□□□ 0.38
UBXN1-217ENST00000534176 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 TELO2Q9Y4R8 837 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 IGSF9BQ9UPX0 1349 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 KDM3AQ9Y4C1 1321 aa17.45■□□□□ 0.38
UBXN1-217ENST00000534176 GRXCR1A8MXD5 290 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 BAG4O95429 457 aaKnown RBP17.44■□□□□ 0.38
UBXN1-217ENST00000534176 FOSL2P15408 326 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 TMOD1P28289 359 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 PBX2P40425 430 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 IGBP1P78318 339 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 MRPS6P82932 125 aaKnown RBP17.44■□□□□ 0.38
UBXN1-217ENST00000534176 CDC42EP1Q00587 391 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 MBTPS1Q14703 1052 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 TSHZ1Q6ZSZ6 1077 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 DBF4BQ8NFT6 615 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 RAD9AQ99638 391 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 INSL6Q9Y581 213 aa17.44■□□□□ 0.38
UBXN1-217ENST00000534176 PSMD10O75832 226 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 GJB5O95377 273 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 MMP1P03956 469 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 CTSHP09668 335 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 MCM2P49736 904 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 INF2Q27J81 1249 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 EXOC8Q8IYI6 725 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 DNAJB3Q8WWF6 145 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 GABBR1Q9UBS5 961 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 PPME1Q9Y570 386 aa17.43■□□□□ 0.38
UBXN1-217ENST00000534176 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 MARCH6O60337 910 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
UBXN1-217ENST00000534176 FDPSP14324 419 aaKnown RBP17.42■□□□□ 0.38
UBXN1-217ENST00000534176 KLRC1P26715 233 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 MGAT3Q09327 533 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 PIK3AP1Q6ZUJ8 805 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 MIER3Q7Z3K6 550 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 ETNPPLQ8TBG4 499 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 JPH2Q9BR39 696 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-217ENST00000534176 TRPV2Q9Y5S1 764 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 TET1Q8NFU7 2136 aa17.42■□□□□ 0.38
UBXN1-217ENST00000534176 MYH9P35579 1960 aaKnown RBP17.42■□□□□ 0.38
UBXN1-217ENST00000534176 TDP2O95551 362 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 CHRNA1P02708 482 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 OATP04181 439 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 PPP2R5CQ13362 524 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 ORC2Q13416 577 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-217ENST00000534176 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-217ENST00000534176 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 RUFY4Q6ZNE9 571 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 KCNMB3Q9NPA1 279 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 YBX2Q9Y2T7 364 aaKnown RBP17.41■□□□□ 0.38
UBXN1-217ENST00000534176 CDY2AQ9Y6F7 541 aa17.41■□□□□ 0.38
UBXN1-217ENST00000534176 EDIL3O43854 480 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 LARGE1O95461 756 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 CA3P07451 260 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 RABGGTBP53611 331 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 B3GNT9Q6UX72 402 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 FAM184AQ8NB25 1140 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 MAFAQ8NHW3 353 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-217ENST00000534176 MYLIPQ8WY64 445 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 TOP1MTQ969P6 601 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 CELF4Q9BZC1 486 aaKnown RBP17.4■□□□□ 0.38
UBXN1-217ENST00000534176 FAM49AQ9H0Q0 323 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-217ENST00000534176 UNC45AQ9H3U1 944 aa17.4■□□□□ 0.38
UBXN1-217ENST00000534176 GHRP10912 638 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 PSMC5P62195 406 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 PRKCEQ02156 737 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 KRT40Q6A162 431 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
UBXN1-217ENST00000534176 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 C8orf76Q96K31 380 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 COL4A6Q14031 1691 aa17.39■□□□□ 0.37
UBXN1-217ENST00000534176 MICAL3Q7RTP6 2002 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms