RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 RTN4RL1Q86UN2 441 aaPredicted RBP19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 NPAS4Q8IUM7 802 aa19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 GLT8D2Q9H1C3 349 aa19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 AGO4Q9HCK5 861 aaKnown RBP19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
CAPRIN1-216ENST00000534042 SMIM35A0A1B0GVV1 85 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 hCG_1984214I3L0E3 225 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 STXBP3O00186 592 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 MEIS1O00470 390 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 ATG7O95352 703 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 STAG3L1P0CL83 205 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 ZNF76P36508 570 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 PAK2Q13177 524 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 ITGB3BPQ13352 177 aaPredicted RBP19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 AP3B2Q13367 1082 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 CMTR2Q8IYT2 770 aaKnown RBP19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 NME8Q8N427 588 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 ZNF713Q8N859 430 aaPredicted RBP19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 PRKAG3Q9UGI9 489 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 PADI3Q9ULW8 664 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 MYH9P35579 1960 aaKnown RBP19.23■□□□□ 0.67
CAPRIN1-216ENST00000534042 GOLGA8AA7E2F4 631 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 CSPG5O95196 566 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 MMP1P03956 469 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 LTBRP36941 435 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 SREBF1P36956 1147 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 SLC26A2P50443 739 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 KRT76Q01546 638 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 HYAL1Q12794 435 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 CTC1Q2NKJ3 1217 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 MTHFD1LQ6UB35 978 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 P2RX5Q93086 422 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 PLAGL2Q9UPG8 496 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 MRPL42Q9Y6G3 142 aaKnown RBP19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 MUC6Q6W4X9 2439 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 KDM3AQ9Y4C1 1321 aa19.22■□□□□ 0.67
CAPRIN1-216ENST00000534042 PRR33A8MZF0 331 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 DDX39AO00148 427 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 BACH1O14867 736 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 HBP1O60381 514 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 SCG2P13521 617 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 ZP2Q05996 745 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 NAALADL2Q58DX5 795 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 FAM160B1Q5W0V3 765 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 CRIPAKQ8N1N5 446 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 IGFLR1Q9H665 355 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 LRFN2Q9ULH4 789 aa19.21■□□□□ 0.67
CAPRIN1-216ENST00000534042 IGKV6D-21A0A0A0MT36 114 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 KLF18A0A0U1RQI7 1052 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 DCXO43602 365 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 CCNE2O96020 404 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 KLRC1P26715 233 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 CLK2P49760 499 aaKnown RBP19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 NFX1Q12986 1120 aaKnown RBP19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 KRT32Q14532 448 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 ADCK5Q3MIX3 580 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 TSGA10IPQ3SY00 556 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 PAN2Q504Q3 1202 aaKnown RBP19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 PLA2G4DQ86XP0 818 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 ADHFE1Q8IWW8 467 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 RASEFQ8IZ41 740 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 PPP2R3CQ969Q6 453 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 NAP1L2Q9ULW6 460 aaPredicted RBP19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 KIAA1671Q9BY89 1806 aa19.2■□□□□ 0.66
CAPRIN1-216ENST00000534042 ITGB1P05556 798 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 CDC27P30260 824 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 DLX2Q07687 328 aaPredicted RBP19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 CLUL1Q15846 466 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 TMEM266Q2M3C6 531 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 JAKMIP3Q5VZ66 844 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 MIS18BP1Q6P0N0 1132 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 PDXDC2PQ6P474 469 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 ABHD15Q6UXT9 468 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 KLHL23Q8NBE8 558 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 ATP8B4Q8TF62 1192 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 TMX1Q9H3N1 280 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 ZNF302Q9NR11 478 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 FAM217BQ9NTX9 383 aaPredicted RBP19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 GINS2Q9Y248 185 aa19.19■□□□□ 0.66
CAPRIN1-216ENST00000534042 C19orf67A6NJJ6 358 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 MBTPS2O43462 519 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 IBSPP21815 317 aaPredicted RBP19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 RCAN1P53805 252 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 FGD1P98174 961 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 CAMK1Q14012 370 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 ZNF484Q5JVG2 852 aa19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 FAM43BQ6ZT52 329 aaPredicted RBP19.18■□□□□ 0.66
CAPRIN1-216ENST00000534042 SPPL3Q8TCT6 385 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms