RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	FAH	P16930	419 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	KRTAP15-1	Q3LI76	137 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	FAM47C	Q5HY64	1035 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	DPY19L2P1	Q6NXN4	242 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	KCTD1	Q719H9	257 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	JMY	Q8N9B5	988 aa		5.09	□□□□□ -1.59
RDX-215	ENST00000533961	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.09	□□□□□ -1.59
RDX-215	ENST00000533961	PPP1R12A	O14974	1030 aa	Predicted RBP	5.08	□□□□□ -1.6
RDX-215	ENST00000533961	GPR19	Q15760	415 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	PAN2	Q504Q3	1202 aa	Known RBP	5.08	□□□□□ -1.6
RDX-215	ENST00000533961	TCTN3	Q6NUS6	607 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	C16orf59	Q7L2K0	433 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	MTDH	Q86UE4	582 aa	Known RBP	5.08	□□□□□ -1.6
RDX-215	ENST00000533961	NEU4	Q8WWR8	484 aa	Predicted RBP	5.08	□□□□□ -1.6
RDX-215	ENST00000533961	EDA	Q92838	391 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	FBXW5	Q969U6	566 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	JAM3	Q9BX67	310 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	CROT	Q9UKG9	612 aa		5.08	□□□□□ -1.6
RDX-215	ENST00000533961	LOC105371045	A0A1W2PR82	267 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	ARVCF	O00192	962 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	SLC27A2	O14975	620 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	KCNQ2	O43526	872 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	FOXS1	O43638	330 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	TUSC3	Q13454	348 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	SMAD2	Q15796	467 aa	Known RBP	5.07	□□□□□ -1.6
RDX-215	ENST00000533961	NFE2L2	Q16236	605 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	TKFC	Q3LXA3	575 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	DPP8	Q6V1X1	898 aa	Predicted RBP	5.07	□□□□□ -1.6
RDX-215	ENST00000533961	REXO1L1P	Q8IX06	675 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	DTX3	Q8N9I9	347 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.07	□□□□□ -1.6
RDX-215	ENST00000533961	ZSWIM2	Q8NEG5	633 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	THAP3	Q8WTV1	239 aa	Predicted RBP	5.07	□□□□□ -1.6
RDX-215	ENST00000533961	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.07	□□□□□ -1.6
RDX-215	ENST00000533961	VOPP1	Q96AW1	172 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	ZSWIM3	Q96MP5	696 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	MSL2	Q9HCI7	577 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	ADAM29	Q9UKF5	820 aa		5.07	□□□□□ -1.6
RDX-215	ENST00000533961	RAPGEF3	O95398	923 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	ST5	P78524	1137 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	C2orf27A	Q580R0	203 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	TRIM61	Q5EBN2	209 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	FIGN	Q5HY92	759 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	TRMT10B	Q6PF06	316 aa	Known RBP	5.06	□□□□□ -1.6
RDX-215	ENST00000533961	EP400NL	Q6ZTU2	488 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	CLEC4D	Q8WXI8	215 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	EXTL1	Q92935	676 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	GNRHR2	Q96P88	292 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	LMF1	Q96S06	567 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	IPPK	Q9H8X2	491 aa		5.06	□□□□□ -1.6
RDX-215	ENST00000533961	MRPS23	Q9Y3D9	190 aa	Known RBP	5.06	□□□□□ -1.6
RDX-215	ENST00000533961	CUTA	O60888	179 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	FBXO21	O94952	628 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	CNOT4	O95628	575 aa	Known RBP	5.05	□□□□□ -1.6
RDX-215	ENST00000533961	C6orf222	P0C671	652 aa	Predicted RBP	5.05	□□□□□ -1.6
RDX-215	ENST00000533961	COMT	P21964	271 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	HERVK_113	P62684	666 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	LACTB	P83111	547 aa	Predicted RBP	5.05	□□□□□ -1.6
RDX-215	ENST00000533961	GUCY1A3	Q02108	690 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	CRY1	Q16526	586 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	CD276	Q5ZPR3	534 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	CXXC5	Q7LFL8	322 aa	Known RBP	5.05	□□□□□ -1.6
RDX-215	ENST00000533961	PROSER1	Q86XN7	944 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	CLUHP3	Q96NS8	147 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	MRPL4	Q9BYD3	311 aa	Known RBP	5.05	□□□□□ -1.6
RDX-215	ENST00000533961	FANCL	Q9NW38	375 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	FBXO10	Q9UK96	956 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	SRPK3	Q9UPE1	567 aa		5.05	□□□□□ -1.6
RDX-215	ENST00000533961	ZNF839	A8K0R7	811 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	NKRF	O15226	690 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
RDX-215	ENST00000533961	CLASP2	O75122	1294 aa	Known RBP	5.04	□□□□□ -1.6
RDX-215	ENST00000533961	RASGRP1	O95267	797 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	ASMTL	O95671	621 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	DGCR2	P98153	550 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	CSRP2	Q16527	193 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	AGBL4	Q5VU57	503 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	LRCH2	Q5VUJ6	765 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	RALYL	Q86SE5	291 aa	Known RBP	5.04	□□□□□ -1.6
RDX-215	ENST00000533961	GSTCD	Q8NEC7	633 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	PCDH19	Q8TAB3	1148 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	KCNJ15	Q99712	375 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	ARHGAP20	Q9P2F6	1191 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	NDOR1	Q9UHB4	597 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	CD2AP	Q9Y5K6	639 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	ATP23	Q9Y6H3	246 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961	SLC4A7	Q9Y6M7	1214 aa		5.04	□□□□□ -1.6
RDX-215	ENST00000533961		B4E1Z4	1266 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	KNG1	P01042	644 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	ADH4	P08319	380 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	COL6A2	P12110	1019 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	DBP	Q10586	325 aa	Predicted RBP	5.03	□□□□□ -1.6
RDX-215	ENST00000533961	ARHGAP36	Q6ZRI8	547 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	FGD2	Q7Z6J4	655 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	LDLRAD3	Q86YD5	345 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	C1orf210	Q8IVY1	113 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.03	□□□□□ -1.6
RDX-215	ENST00000533961	RBM12B	Q8IXT5	1001 aa	Known RBP	5.03	□□□□□ -1.6
RDX-215	ENST00000533961	SLC7A14	Q8TBB6	771 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	AJUBA	Q96IF1	538 aa		5.03	□□□□□ -1.6
RDX-215	ENST00000533961	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms