RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PCED1AQ9H1Q7 454 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 CBLCQ9ULV8 474 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 OAZ3Q9UMX2 235 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 ATP23Q9Y6H3 246 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 CDC14BO60729 498 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 C6orf222P0C671 652 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 CR2P20023 1033 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 COMTP21964 271 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 PTGS1P23219 599 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 ETV4P43268 484 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 KCNQ1P51787 676 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 JAM2P57087 298 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 SUMO1P63165 101 aaKnown RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 ST5P78524 1137 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 IL13RA1P78552 427 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 SSRP1Q08945 709 aaKnown RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 USP39Q53GS9 565 aaKnown RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 SCUBE1Q8IWY4 988 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 IPO9Q96P70 1041 aaKnown RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 KIAA1683Q9H0B3 1180 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 C12orf65Q9H3J6 166 aaKnown RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 INCENPQ9NQS7 918 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 PPP1R1BQ9UD71 204 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 ING1Q9UK53 422 aaPredicted RBP4.72□□□□□ -1.65
BRCA2-205ENST00000533776 MSRB2Q9Y3D2 182 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 NR2E1Q9Y466 385 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 PCDHA9Q9Y5H5 950 aa4.72□□□□□ -1.65
BRCA2-205ENST00000533776 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 ARVCFO00192 962 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 DIAPH1O60610 1272 aaKnown RBP4.71□□□□□ -1.66
BRCA2-205ENST00000533776 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
BRCA2-205ENST00000533776 HMGCRP04035 888 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 AOAHP28039 575 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 GJA4P35212 333 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 DNM2P50570 870 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 RASGRF1Q13972 1273 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 CRY1Q16526 586 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 AGBL4Q5VU57 503 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 RNF207Q6ZRF8 634 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 C16orf59Q7L2K0 433 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 CISD2Q8N5K1 135 aaKnown RBP4.71□□□□□ -1.66
BRCA2-205ENST00000533776 SCYL1Q96KG9 808 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 EXOC2Q96KP1 924 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 ZDHHC5Q9C0B5 715 aa4.71□□□□□ -1.66
BRCA2-205ENST00000533776 CCDC66A2RUB6 948 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 WNT9AO14904 365 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 ARHGAP6O43182 974 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 RAD17O75943 681 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 ACO1P21399 889 aaKnown RBP4.7□□□□□ -1.66
BRCA2-205ENST00000533776 FOXE3Q13461 319 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 TBR1Q16650 682 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 LARP4Q71RC2 724 aaKnown RBP eCLIP4.7□□□□□ -1.66
BRCA2-205ENST00000533776 POLNQ7Z5Q5 900 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 ZC3H7AQ8IWR0 971 aaKnown RBP4.7□□□□□ -1.66
BRCA2-205ENST00000533776 ZBTB38Q8NAP3 1195 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-205ENST00000533776 NAF1Q96HR8 494 aaKnown RBP4.7□□□□□ -1.66
BRCA2-205ENST00000533776 PLA2G12BQ9BX93 195 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 CSRNP2Q9H175 543 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 SMURF1Q9HCE7 757 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 GALNT8Q9NY28 637 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 CDC42EP3Q9UKI2 254 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
BRCA2-205ENST00000533776 MATN2O00339 956 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 CRTAMO95727 393 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 FAM153BP0C7A2 387 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 NAT1P18440 290 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 GABREP78334 506 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 MIIPQ5JXC2 388 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 LRSAM1Q6UWE0 723 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 Q6ZSN1 163 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 OTOP2Q7RTS6 562 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 ZNF808Q8N4W9 903 aaPredicted RBP4.69□□□□□ -1.66
BRCA2-205ENST00000533776 EDAQ92838 391 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 EXTL1Q92935 676 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 UCKL1Q9NWZ5 548 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 BTBD7Q9P203 1132 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 FBXO10Q9UK96 956 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 SLC30A1Q9Y6M5 507 aa4.69□□□□□ -1.66
BRCA2-205ENST00000533776 SCDO00767 359 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 GSTA4O15217 222 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 CLASP2O75122 1294 aaKnown RBP4.68□□□□□ -1.66
BRCA2-205ENST00000533776 MPIG6BO95866 241 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 MMEP08473 750 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 DGCR2P98153 550 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 DUSP8Q13202 625 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 FHL2Q14192 279 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 NAALADL2Q58DX5 795 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 FILIP1Q7Z7B0 1213 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 ZNF575Q86XF7 245 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 WDR48Q8TAF3 677 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 ZNF503Q96F45 646 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 WNK4Q96J92 1243 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 BTBD2Q9BX70 525 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 AMNQ9BXJ7 453 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 CCDC113Q9H0I3 377 aa4.68□□□□□ -1.66
BRCA2-205ENST00000533776 PUF60Q9UHX1 559 aaKnown RBP4.68□□□□□ -1.66
BRCA2-205ENST00000533776 MRPS23Q9Y3D9 190 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms