RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 KLRC3Q07444 240 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 THOC5Q13769 683 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 DARS2Q6PI48 645 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 POTEDQ86YR6 584 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 RHPN2Q8IUC4 686 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 CEP95Q96GE4 821 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ACAD9Q9H845 621 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ZNF302Q9NR11 478 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 HUS1O60921 280 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 FDX1P10109 184 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 TSPY1Q01534 308 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 GUCY2DQ02846 1103 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 SEPT6Q14141 434 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ZNF568Q3ZCX4 644 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PSPC1Q8WXF1 523 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 DNAJC5Q9H3Z4 198 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 THAP9Q9H5L6 903 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 CPDO75976 1380 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ARHGAP42A6NI28 874 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ASPHQ12797 758 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 SNX1Q13596 522 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 TSNAXIP1Q2TAA8 658 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ZNF394Q53GI3 561 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 SWSAP1Q6NVH7 229 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 LMNTD2Q8IXW0 634 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 TTC30BQ8N4P2 665 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 TTC25Q96NG3 672 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 RPAP3Q9H6T3 665 aaPredicted RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ABCC3O15438 1527 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 F8W8V4 182 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 RBL2Q08999 1139 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 NECTIN1Q15223 517 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 VPS72Q15906 364 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 CDO1Q16878 200 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PPP1R18Q6NYC8 613 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PADI6Q6TGC4 694 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ERICH1Q86X53 443 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 MYRIPQ8NFW9 859 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.89□□□□□ -1.316e-21■■□□□ 11.4
UBQLN1-206ENST00000533705 PAGE5Q96GU1 130 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 NCAPGQ9BPX3 1015 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 LBHD1Q9BQE6 289 aaPredicted RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 KIAA1586Q9HCI6 787 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 CRB1P82279 1406 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 TXNDC9O14530 226 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 BASP1P80723 227 aaKnown RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PFKFB3Q16875 520 aaPredicted RBP6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 SLFNL1Q499Z3 407 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 NDUFAF2Q8N183 169 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 GPT2Q8TD30 523 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 FAM20AQ96MK3 541 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 ISCA1Q9BUE6 129 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 DONSONQ9NYP3 566 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 JRKLQ9Y4A0 524 aa6.89□□□□□ -1.31
UBQLN1-206ENST00000533705 NEMP1O14524 444 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 NMT2O60551 498 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 ECEL1O95672 775 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 SFNP31947 248 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 NAA25Q14CX7 972 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 TBC1D10CQ8IV04 446 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 TDRD7Q8NHU6 1098 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 NDST4Q9H3R1 872 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 FAM114A2Q9NRY5 505 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 SPATA31A6Q5VVP1 1343 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 A0A087WWV3 80 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 ASB14A6NK59 587 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 TTC36A6NLP5 189 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 KCNA4P22459 653 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GTF2A1P52655 376 aaPredicted RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 ZBED6P86452 979 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GABBR1Q9UBS5 961 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 TARBP1Q13395 1621 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 CPSF1Q10570 1443 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GOLGA8KD6RF30 607 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 PGRMC1O00264 195 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GOLGA8FQ08AF8 430 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GOLGA8DPQ0D2H9 430 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 BEST2Q8NFU1 509 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 NEK9Q8TD19 979 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 LRRC8CQ8TDW0 803 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 MTRQ99707 1265 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 MTIF3Q9H2K0 278 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 SERPING1P05155 500 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 HSPA6P17066 643 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 KPNA2P52292 529 aaKnown RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 CUL4AQ13619 759 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 MMEL1Q495T6 779 aa6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 GCOM2Q9BZD3 368 aaPredicted RBP6.88□□□□□ -1.31
UBQLN1-206ENST00000533705 TLK1Q9UKI8 766 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms