RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CUL5Q93034 780 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
COPB1-210ENST00000533533 SLC26A6Q9BXS9 759 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 AGXT2Q9BYV1 514 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 EHMT1Q9H9B1 1298 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 CLDND1Q9NY35 253 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 RWDD3Q9Y3V2 267 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 CNTNAP5Q8WYK1 1306 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 EVPLQ92817 2033 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 PIK3CDO00329 1044 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 GRM6O15303 877 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 GHRP10912 638 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 RCAN1P53805 252 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 AK2P54819 239 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 NAPAP54920 295 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 ANKRD1Q15327 319 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 CPLX2Q6PUV4 134 aaKnown RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 NLRX1Q86UT6 975 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 ADHFE1Q8IWW8 467 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 GIMAP8Q8ND71 665 aaPredicted RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 CLP1Q92989 425 aaKnown RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 PHKBQ93100 1093 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 LMAN2LQ9H0V9 348 aa9.94□□□□□ -0.82
COPB1-210ENST00000533533 SLKQ9H2G2 1235 aaPredicted RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 RC3H2Q9HBD1 1191 aaKnown RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
COPB1-210ENST00000533533 KIAA1671Q9BY89 1806 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 ZFHX2Q9C0A1 2572 aaPredicted RBP9.93□□□□□ -0.82
COPB1-210ENST00000533533 ENPP3O14638 875 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 MEIS2O14770 477 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 TCF7P36402 384 aaPredicted RBP9.93□□□□□ -0.82
COPB1-210ENST00000533533 MGAT3Q09327 533 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 LPIN1Q14693 890 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 WWC2Q6AWC2 1192 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 RSPH3Q86UC2 560 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 ALYREFQ86V81 257 aaKnown RBP9.93□□□□□ -0.82
COPB1-210ENST00000533533 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 ZNF274Q96GC6 653 aaPredicted RBP9.93□□□□□ -0.82
COPB1-210ENST00000533533 PSTPIP2Q9H939 334 aa9.93□□□□□ -0.82
COPB1-210ENST00000533533 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 MBLAC1A4D2B0 266 aaPredicted RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 ATP9AO75110 1047 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 DGKIO75912 1065 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 KCNA2P16389 499 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 IRS1P35568 1242 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 DLX2Q07687 328 aaPredicted RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 HYAL1Q12794 435 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 BTG3Q14201 252 aaPredicted RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 SMAD2Q15796 467 aaKnown RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 CLUL1Q15846 466 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 GRIK4Q16099 956 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 UBE2SQ16763 222 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 FBXO47Q5MNV8 452 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 MARCH8Q5T0T0 291 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 DNAJB3Q8WWF6 145 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 SEPT1Q8WYJ6 367 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 ZNF689Q96CS4 500 aaPredicted RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 POP1Q99575 1024 aaKnown RBP9.92□□□□□ -0.82
COPB1-210ENST00000533533 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 KCNH6Q9H252 994 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 ERAP1Q9NZ08 941 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 TUBE1Q9UJT0 475 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 MYO10Q9HD67 2058 aa9.92□□□□□ -0.82
COPB1-210ENST00000533533 FAM186AA6NE01 2351 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 SMCO2A6NFE2 343 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 SPDYE3A6NKU9 549 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 PRPF3O43395 683 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 MBTPS2O43462 519 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 DTNBO60941 627 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 MMP1P03956 469 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 SCG2P13521 617 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 IFNAR1P17181 557 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 ITGB5P18084 799 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 MARK3P27448 753 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 GTF2F1P35269 517 aaKnown RBP eCLIP9.91□□□□□ -0.823e-9■■■■■ 105.7
COPB1-210ENST00000533533 CLCN6P51797 869 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 ADCY7P51828 1080 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 EVCP57679 992 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 MRPS6P82932 125 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 NHLH1Q02575 133 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 FUT2Q10981 343 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 SCRN1Q12765 414 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 SMAD4Q13485 552 aaKnown RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 CAMK1Q14012 370 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 PFKFB3Q16875 520 aaPredicted RBP9.91□□□□□ -0.82
COPB1-210ENST00000533533 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
COPB1-210ENST00000533533 GLG1Q92896 1179 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms