RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SLC5A5Q92911 643 aa34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 PCDHA2Q9Y5H9 948 aa34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 TLL1O43897 1013 aa34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 TDP2O95551 362 aa34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 MOXD1Q6UVY6 613 aa34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 GAS2L1Q99501 681 aaPredicted RBP34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 ZBED2Q9BTP6 218 aa34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 FAM49AQ9H0Q0 323 aaPredicted RBP34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 SAMM50Q9Y512 469 aa34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 MAFBQ9Y5Q3 323 aaPredicted RBP34.27■■■■□ 3.08
SSSCA1-207ENST00000533115 CCDC194A0A1B0GVG4 234 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 WDR64B1ANS9 1081 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 GAS7O60861 476 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 ATP4AP20648 1035 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 INF2Q27J81 1249 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 MTHFD1LQ6UB35 978 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 NSUN7Q8NE18 718 aaKnown RBP34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 MBOAT7Q96N66 472 aa34.26■■■■□ 3.08
SSSCA1-207ENST00000533115 MYO9BQ13459 2157 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 GJB5O95377 273 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 LRCH2Q5VUJ6 765 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 CKAP2LQ8IYA6 745 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 APBB2Q92870 758 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 TEKT3Q9BXF9 490 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 IFIH1Q9BYX4 1025 aaKnown RBP34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 GABBR1Q9UBS5 961 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 CDY2AQ9Y6F7 541 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 CHD7Q9P2D1 2997 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 MICAL3Q7RTP6 2002 aa34.25■■■■□ 3.07
SSSCA1-207ENST00000533115 COL1A2P08123 1366 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 AMHP03971 560 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 MRPS6P82932 125 aaKnown RBP34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 ZNF484Q5JVG2 852 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 OXER1Q8TDS5 423 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 GJA10Q969M2 543 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 DISC1Q9NRI5 854 aa34.24■■■■□ 3.07
SSSCA1-207ENST00000533115 SMIM35A0A1B0GVV1 85 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 GHRP10912 638 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 IER5Q5VY09 327 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 BBXQ8WY36 941 aaPredicted RBP34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 LIMCH1Q9UPQ0 1083 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 EYSQ5T1H1 3165 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 SIP14410 1827 aa34.23■■■■□ 3.07
SSSCA1-207ENST00000533115 MYH9P35579 1960 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 PSMD10O75832 226 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 KLRC1P26715 233 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 TAP1Q03518 808 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 LPIN1Q14693 890 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 LETM2Q2VYF4 491 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 RAD9AQ99638 391 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 UNC45AQ9H3U1 944 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 DDX25Q9UHL0 483 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 IGSF9BQ9UPX0 1349 aa34.22■■■■□ 3.07
SSSCA1-207ENST00000533115 ZBTB42B2RXF5 422 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 CHMP2AO43633 222 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 JAK2O60674 1132 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 ARHGEF15O94989 841 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 SFNP31947 248 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 JAK3P52333 1124 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 FBXO47Q5MNV8 452 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 FAM117BQ6P1L5 589 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 PIK3AP1Q6ZUJ8 805 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 NEK8Q86SG6 692 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 MYOCDQ8IZQ8 938 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 NME8Q8N427 588 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 ETNPPLQ8TBG4 499 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 KIF2CQ99661 725 aa34.21■■■■□ 3.07
SSSCA1-207ENST00000533115 ST3GAL1Q11201 340 aa34.2■■■■□ 3.07
SSSCA1-207ENST00000533115 ADGRE1Q14246 886 aa34.2■■■■□ 3.07
SSSCA1-207ENST00000533115 TRPV2Q9Y5S1 764 aa34.2■■■■□ 3.07
SSSCA1-207ENST00000533115 LCHNA4D1U4 455 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 M0QZ92 97 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 KRT2P35908 639 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 TMEM62Q0P6H9 643 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 TRMT1LQ7Z2T5 733 aaKnown RBP34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 FAM167AQ96KS9 214 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 BRMS1Q9HCU9 246 aa34.19■■■■□ 3.06
SSSCA1-207ENST00000533115 LOC101059915A0A1B0GWI6 518 aaPredicted RBP34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 SLC37A4O43826 429 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 PPP4R3AQ6IN85 833 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 TSHZ1Q6ZSZ6 1077 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 RDM1Q8NG50 284 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 CERS4Q9HA82 394 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 SQORQ9Y6N5 450 aa34.18■■■■□ 3.06
SSSCA1-207ENST00000533115 GCFC2P16383 781 aaKnown RBP34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 WDR81Q562E7 1941 aa34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 B3GNT9Q6UX72 402 aa34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 MIER3Q7Z3K6 550 aa34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 NAP1L4Q99733 375 aaKnown RBP34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 CELF4Q9BZC1 486 aaKnown RBP34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 CEP131Q9UPN4 1083 aa34.17■■■■□ 3.06
SSSCA1-207ENST00000533115 ZNF862O60290 1169 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 C22orf31O95567 290 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 IGFBP4P22692 258 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 NR5A1Q13285 461 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 EARS2Q5JPH6 523 aaKnown RBP34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 KIAA0319LQ8IZA0 1049 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 TOP1MTQ969P6 601 aa34.16■■■■□ 3.06
SSSCA1-207ENST00000533115 INSL6Q9Y581 213 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms