RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 FAM160B1Q5W0V3 765 aa14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 MIS18BP1Q6P0N0 1132 aa14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 FOXP1Q9H334 677 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 TUBE1Q9UJT0 475 aa14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 PCDHA10Q9Y5I2 948 aa14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 TRIP12Q14669 1992 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC4-212ENST00000533058 DOCK5Q9H7D0 1870 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 POTEB3A0JP26 581 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 FAM205CA6NFA0 338 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 MSH4O15457 936 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 HBP1O60381 514 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 IKBKEQ14164 716 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 PLEKHG4Q58EX7 1191 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 POTEBQ6S5H4 581 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 FAM43BQ6ZT52 329 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 NEK8Q86SG6 692 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 RSPH3Q86UC2 560 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 SLC5A5Q92911 643 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 NOL7Q9UMY1 257 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 MAFBQ9Y5Q3 323 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC4-212ENST00000533058 TET1Q8NFU7 2136 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 SCN5AQ14524 2016 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 BACH1O14867 736 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 MARCH6O60337 910 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 CCNT1O60563 726 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 PSAPP07602 524 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 SYT1P21579 422 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 KCNJ6P48051 423 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 WDR5P61964 334 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 EARS2Q5JPH6 523 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 SWSAP1Q6NVH7 229 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 HERC6Q8IVU3 1022 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 CCDC60Q8IWA6 550 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 DBF4BQ8NFT6 615 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 RDM1Q8NG50 284 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 APBB2Q92870 758 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 TNFRSF25Q93038 417 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 NAP1L4Q99733 375 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 SLC28A3Q9HAS3 691 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 ZNF302Q9NR11 478 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 TCEAL9Q9UHQ7 104 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 TRPC6Q9Y210 931 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 YBX2Q9Y2T7 364 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 PCDHA2Q9Y5H9 948 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 COL1A2P08123 1366 aa14.6□□□□□ -0.07
TRAPPC4-212ENST00000533058 SMIM35A0A1B0GVV1 85 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 STX6O43752 255 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 TDP2O95551 362 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 SFNP31947 248 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 MGAT3Q09327 533 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 ZNF484Q5JVG2 852 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 FOXD4L5Q5VV16 416 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 PPP4R3AQ6IN85 833 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 PDXDC2PQ6P474 469 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 B3GNT9Q6UX72 402 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 FERMT3Q86UX7 667 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 NME8Q8N427 588 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 FOXD4L4Q8WXT5 416 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 SEPT8Q92599 483 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 UIMC1Q96RL1 719 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 SQORQ9Y6N5 450 aa14.59□□□□□ -0.07
TRAPPC4-212ENST00000533058 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 PSMD10O75832 226 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 CHRNA1P02708 482 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 GCFC2P16383 781 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 ATP4AP20648 1035 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 JAK3P52333 1124 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 RABGGTBP53611 331 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 TCTN1Q2MV58 587 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 LRCH2Q5VUJ6 765 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 TEKT3Q9BXF9 490 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 NKX2-4Q9H2Z4 354 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 DISC1Q9NRI5 854 aa14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 RBM19Q9Y4C8 960 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-212ENST00000533058 TBX3O15119 743 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 GAS7O60861 476 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 GJB5O95377 273 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 CTSHP09668 335 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 IGBP1P78318 339 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 IER5Q5VY09 327 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 MTHFD1LQ6UB35 978 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 USP38Q8NB14 1042 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 DNAJB3Q8WWF6 145 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 FAM167AQ96KS9 214 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 FAM20AQ96MK3 541 aa14.57□□□□□ -0.08
TRAPPC4-212ENST00000533058 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms