RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 GNL1P36915 607 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ECE1P42892 770 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PRELPP51888 382 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PEX3P56589 373 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 MMEL1Q495T6 779 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 CTAGE3PQ8IX95 158 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PLEKHA4Q9H4M7 779 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 SUFUQ9UMX1 484 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 FLT1P17948 1338 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 SFI1A8K8P3 1242 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 CDC27P30260 824 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 MTMR2Q13614 643 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 KIAA1841Q6NSI8 718 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 AFAP1L1Q8TED9 768 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 GRK7Q8WTQ7 553 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ATP8B3O60423 1300 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 LRRN2O75325 713 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ARHGAP4P98171 946 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 NFX1Q12986 1120 aaKnown RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PSMD2Q13200 908 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 Q9H521 79 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ACAD9Q9H845 621 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 SAR1BQ9Y6B6 198 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8QA0A0J9YX86 632 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8OA6NCC3 632 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ARHGAP42A6NI28 874 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8NF8WBI6 632 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GSTA4O15217 222 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FCER1AP12319 257 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 RCAN1P53805 252 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CLNS1AP54105 237 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MTMR3Q13615 1198 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FASTKD5Q7L8L6 764 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 TCP11Q8WWU5 503 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.43□□□□□ -0.95e-6■■■□□ 16.7
CTNND1-232ENST00000532649 SPDL1Q96EA4 605 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 SLC12A6Q9UHW9 1150 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CASP14P31944 242 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 STAT3P40763 770 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ARPP19P56211 112 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MRFAP1L1Q96HT8 127 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8IPA6NC78 632 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8JA6NMD2 632 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 SAT1P21673 171 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ANGEL2Q5VTE6 544 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CATSPER4Q7RTX7 472 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CXorf38Q8TB03 319 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MSTO1Q9BUK6 570 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MRPL46Q9H2W6 279 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 RPF1Q9H9Y2 349 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CEMIPQ8WUJ3 1361 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 PXDNLA1KZ92 1463 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 DNAJC8O75937 253 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 TTLL4Q14679 1199 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 PDIA6Q15084 440 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CDC42EP5Q6NZY7 148 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FAM71BQ8TC56 605 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 CCDC124Q96CT7 223 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FAM167AQ96KS9 214 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 EFCC1Q9HA90 598 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GCNT4Q9P109 453 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF70Q9UC06 446 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FAN1Q9Y2M0 1017 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 MST1RQ04912 1400 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FAM95CA0A1B0GW59 222 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GNGT2O14610 69 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 RSRC2Q7L4I2 434 aaKnown RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-232ENST00000532649 FAM149B1Q96BN6 582 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 ATP6V0A4Q9HBG4 840 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 GGA3Q9NZ52 723 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 RWDD2AQ9UIY3 292 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 PPP2R2CQ9Y2T4 447 aa9.43□□□□□ -0.9
CTNND1-232ENST00000532649 A6NJR5 290 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 PPP1R12AO14974 1030 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 MYO1EQ12965 1108 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 ALCAMQ13740 583 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 RUFY4Q6ZNE9 571 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 SLC7A5P2Q9GIP4 190 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 GNAT1P11488 350 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 CCNE1P24864 410 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 GMPSP49915 693 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 MXI1P50539 228 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms