RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 JAK3P52333 1124 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 LRIT3Q3SXY7 679 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 ZNF365Q70YC5 407 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 KIF3AQ9Y496 699 aa15.72■□□□□ 0.11
TSPAN4-220ENST00000532375 SIP14410 1827 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 CXCL10P02778 98 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 TRAPPC10P48553 1259 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 TCTN1Q2MV58 587 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 FAM26DQ5JW98 314 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 LRRC8DQ7L1W4 858 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 MIER3Q7Z3K6 550 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 SLFN12Q8IYM2 578 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 TRPC6Q9Y210 931 aa15.71■□□□□ 0.11
TSPAN4-220ENST00000532375 NEMFO60524 1076 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 MCM7P33993 719 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 RFC2P35250 354 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 THPOP40225 353 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 NBR1Q14596 966 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 EPHA7Q15375 998 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 TARBP2Q15633 366 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 ZNF174Q15697 407 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 CALCRLQ16602 461 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 CCDC155Q8N6L0 562 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 HERVK_113Q902F9 699 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 CXXC1Q9P0U4 656 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 SAMM50Q9Y512 469 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 PCDHA2Q9Y5H9 948 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 LOXHD1Q8IVV2 1947 aa15.7■□□□□ 0.1
TSPAN4-220ENST00000532375 SZT2Q5T011 3432 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 CAND2O75155 1236 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 CHRNA1P02708 482 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 KLRC1P26715 233 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 IGBP1P78318 339 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 MGAT3Q09327 533 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 TTC38Q5R3I4 469 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 TAF2Q6P1X5 1199 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 MTHFD1LQ6UB35 978 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 DEFB128Q7Z7B8 93 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 RPUSD2Q8IZ73 545 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 LINC01465Q8N7H1 131 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 HSD17B14Q9BPX1 270 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 NIFKQ9BYG3 293 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 COL1A2P08123 1366 aa15.69■□□□□ 0.1
TSPAN4-220ENST00000532375 SMIM35A0A1B0GVV1 85 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 SLITRK3O94933 977 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 BAG4O95429 457 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 PARNO95453 639 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 C22orf31O95567 290 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 FGBP02675 491 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 OATP04181 439 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 PFKMP08237 780 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 SYT1P21579 422 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 TXKP42681 527 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 PRKCEQ02156 737 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 PSRC1Q6PGN9 363 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 KIAA0319LQ8IZA0 1049 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 BANK1Q8NDB2 785 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 RGL1Q9NZL6 768 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 TCEAL9Q9UHQ7 104 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 PTPRSQ13332 1948 aa15.68■□□□□ 0.1
TSPAN4-220ENST00000532375 TMEM150BA6NC51 233 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 H3BQV1 296 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 P4HBP07237 508 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 QARSP47897 775 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 PSMC5P62195 406 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 FAM109BQ6ICB4 259 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 ANO5Q75V66 913 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 OTOP2Q7RTS6 562 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 CKAP2LQ8IYA6 745 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 LRCH3Q96II8 777 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 FAM167AQ96KS9 214 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 NRBP2Q9NSY0 501 aa15.67■□□□□ 0.1
TSPAN4-220ENST00000532375 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 ZBTB39O15060 712 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 MARCH6O60337 910 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 CTSHP09668 335 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 GNL2Q13823 731 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 IL17AQ16552 155 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 PLEKHG4Q58EX7 1191 aa15.66■□□□□ 0.1
TSPAN4-220ENST00000532375 MCTP1Q6DN14 999 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms