RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 GUCD1Q96NT3 240 aa25.97■■□□□ 1.75
CAPN1-222ENST00000532285 NAP1L4Q99733 375 aaKnown RBP25.97■■□□□ 1.75
CAPN1-222ENST00000532285 PCDHA11Q9Y5I1 949 aa25.97■■□□□ 1.75
CAPN1-222ENST00000532285 LOXHD1Q8IVV2 1947 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 PSMD10O75832 226 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 MMP1P03956 469 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 GCFC2P16383 781 aaKnown RBP25.96■■□□□ 1.75
CAPN1-222ENST00000532285 SFNP31947 248 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 PLEKHG4Q58EX7 1191 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 PPP4R3AQ6IN85 833 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 CKAP2LQ8IYA6 745 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 ETNPPLQ8TBG4 499 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 DNAJB3Q8WWF6 145 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 ZNF576Q9H609 170 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 DISC1Q9NRI5 854 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 STXBP5LQ9Y2K9 1186 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 PCDHA2Q9Y5H9 948 aa25.96■■□□□ 1.75
CAPN1-222ENST00000532285 COL1A2P08123 1366 aa25.95■■□□□ 1.75
CAPN1-222ENST00000532285 JAK3P52333 1124 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 RABGGTBP53611 331 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 WDR5P61964 334 aaKnown RBP25.95■■□□□ 1.74
CAPN1-222ENST00000532285 ZNF484Q5JVG2 852 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 TRAPPC12Q8WVT3 735 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 BBXQ8WY36 941 aaPredicted RBP25.95■■□□□ 1.74
CAPN1-222ENST00000532285 UNC45AQ9H3U1 944 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 GABBR1Q9UBS5 961 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 COL6A3P12111 3177 aa25.95■■□□□ 1.74
CAPN1-222ENST00000532285 CHRNA1P02708 482 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 ATP4AP20648 1035 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 NR5A1Q13285 461 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 TCTN1Q2MV58 587 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 KRT40Q6A162 431 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 MTHFD1LQ6UB35 978 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 DBF4BQ8NFT6 615 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 RDM1Q8NG50 284 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 TNFRSF25Q93038 417 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 GJA10Q969M2 543 aa25.94■■□□□ 1.74
CAPN1-222ENST00000532285 YBX2Q9Y2T7 364 aaKnown RBP25.94■■□□□ 1.74
CAPN1-222ENST00000532285 CHD9Q3L8U1 2897 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 CDH23Q9H251 3354 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 CHMP2AO43633 222 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 SLC37A4O43826 429 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 ST18O60284 1047 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 CCNT1O60563 726 aaKnown RBP25.93■■□□□ 1.74
CAPN1-222ENST00000532285 EARS2Q5JPH6 523 aaKnown RBP25.93■■□□□ 1.74
CAPN1-222ENST00000532285 HERC6Q8IVU3 1022 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 SEPT8Q92599 483 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 ZBTB10Q96DT7 871 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 FAM167AQ96KS9 214 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 FAM20AQ96MK3 541 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 CDX2Q99626 313 aaPredicted RBP25.93■■□□□ 1.74
CAPN1-222ENST00000532285 NKX2-4Q9H2Z4 354 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 SLC28A3Q9HAS3 691 aa25.93■■□□□ 1.74
CAPN1-222ENST00000532285 IGSF9BQ9UPX0 1349 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 SMIM35A0A1B0GVV1 85 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 KIF28PB7ZC32 967 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 KLRC1P26715 233 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 FOSBP53539 338 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 HMGN5P82970 282 aaKnown RBP25.92■■□□□ 1.74
CAPN1-222ENST00000532285 MGAT3Q09327 533 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 IER5Q5VY09 327 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 MIER3Q7Z3K6 550 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 DIS3L2Q8IYB7 885 aaKnown RBP25.92■■□□□ 1.74
CAPN1-222ENST00000532285 FAM49AQ9H0Q0 323 aaPredicted RBP25.92■■□□□ 1.74
CAPN1-222ENST00000532285 KCNMB3Q9NPA1 279 aa25.92■■□□□ 1.74
CAPN1-222ENST00000532285 MYO9BQ13459 2157 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 BTBD18B2RXH4 712 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 MRPS6P82932 125 aaKnown RBP25.91■■□□□ 1.74
CAPN1-222ENST00000532285 B3GNT9Q6UX72 402 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 NME8Q8N427 588 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 APBB2Q92870 758 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 OSBPL7Q9BZF2 842 aa25.91■■□□□ 1.74
CAPN1-222ENST00000532285 ZBTB42B2RXF5 422 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 M0QZ92 97 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 TBX3O15119 743 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 MYOGP15173 224 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 GRIN2CQ14957 1233 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 SAFBQ15424 915 aaKnown RBP eCLIP25.9■■□□□ 1.74
CAPN1-222ENST00000532285 TBC1D32Q96NH3 1257 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 IFIH1Q9BYX4 1025 aaKnown RBP25.9■■□□□ 1.74
CAPN1-222ENST00000532285 NRBP2Q9NSY0 501 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 CEP131Q9UPN4 1083 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 CDY2AQ9Y6F7 541 aa25.9■■□□□ 1.74
CAPN1-222ENST00000532285 FAM205CA6NFA0 338 aa25.89■■□□□ 1.74
CAPN1-222ENST00000532285 DEFB103AP81534 67 aa25.89■■□□□ 1.74
CAPN1-222ENST00000532285 TRMT1LQ7Z2T5 733 aaKnown RBP25.89■■□□□ 1.74
CAPN1-222ENST00000532285 C8orf76Q96K31 380 aa25.89■■□□□ 1.74
CAPN1-222ENST00000532285 ZNF862O60290 1169 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 MARCH6O60337 910 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 OATP04181 439 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 MKRN4PQ13434 485 aaPredicted RBP25.88■■□□□ 1.73
CAPN1-222ENST00000532285 LPIN1Q14693 890 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 FBXO47Q5MNV8 452 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 PPP2R2DQ66LE6 453 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 FAM184AQ8NB25 1140 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 MYLIPQ8WY64 445 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 ZBED2Q9BTP6 218 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 SQORQ9Y6N5 450 aa25.88■■□□□ 1.73
CAPN1-222ENST00000532285 TLL1O43897 1013 aa25.87■■□□□ 1.73
CAPN1-222ENST00000532285 BAG4O95429 457 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms