RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CKMP06732 381 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 FAM153BP0C7A2 387 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 FAHP16930 419 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 PAN2Q504Q3 1202 aaKnown RBP6.08□□□□□ -1.44
USP47-211ENST00000531513 USP53Q70EK8 1073 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 OTOP3Q7RTS5 596 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 KRT26Q7Z3Y9 468 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 STPG3Q8N7X2 389 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 UHMK1Q8TAS1 419 aaKnown RBP6.08□□□□□ -1.44
USP47-211ENST00000531513 ZNF341Q9BYN7 854 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 CD2APQ9Y5K6 639 aa6.08□□□□□ -1.44
USP47-211ENST00000531513 PARNO95453 639 aaKnown RBP6.07□□□□□ -1.44
USP47-211ENST00000531513 HS1BP3Q53T59 392 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 ZC3H12BQ5HYM0 836 aaKnown RBP6.07□□□□□ -1.44
USP47-211ENST00000531513 CCDC181Q5TID7 509 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 CD276Q5ZPR3 534 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 IFNL2Q8IZJ0 200 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 ZBTB38Q8NAP3 1195 aaPredicted RBP6.07□□□□□ -1.44
USP47-211ENST00000531513 ARHGEF4Q9NR80 690 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 TYW1Q9NV66 732 aaKnown RBP6.07□□□□□ -1.44
USP47-211ENST00000531513 ARHGAP20Q9P2F6 1191 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 PTPN22Q9Y2R2 807 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 TELO2Q9Y4R8 837 aa6.07□□□□□ -1.44
USP47-211ENST00000531513 IQCA1LA6NCM1 817 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 ADCY3O60266 1144 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 ZNF888P0CJ79 500 aaPredicted RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 FGFR1P11362 822 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 COL6A2P12110 1019 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 GRK2P25098 689 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 GRK3P35626 688 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 PRKD1Q15139 912 aaPredicted RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 RSPO2Q6UXX9 243 aaPredicted RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 RNF207Q6ZRF8 634 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 REXO1L1PQ8IX06 675 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 ADOQ96SZ5 270 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 KATNBL1Q9H079 304 aa6.06□□□□□ -1.44
USP47-211ENST00000531513 ZFR2Q9UPR6 939 aaKnown RBP6.06□□□□□ -1.44
USP47-211ENST00000531513 CCDC163A0A0D9SF12 145 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 ZNF839A8K0R7 811 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 NPIPB8E9PQR5 432 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 IL18BPO95998 194 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 PDGFRBP09619 1106 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 GNAT1P11488 350 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 PFKPQ01813 784 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 USP10Q14694 798 aaKnown RBP6.05□□□□□ -1.44
USP47-211ENST00000531513 NTRK3Q16288 839 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 NINJ1Q92982 152 aa6.05□□□□□ -1.44
USP47-211ENST00000531513 NEIL1Q96FI4 390 aaPredicted RBP6.05□□□□□ -1.44
USP47-211ENST00000531513 AARSD1Q9BTE6 412 aaKnown RBP6.05□□□□□ -1.44
USP47-211ENST00000531513 H0Y858 1186 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 NKRFO15226 690 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP47-211ENST00000531513 RFPL3O75679 317 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 S100BP04271 92 aaPredicted RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 FOXE3Q13461 319 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 HABP4Q5JVS0 413 aaKnown RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 MIIPQ5JXC2 388 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 KCNT2Q6UVM3 1135 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 LBX2Q6XYB7 198 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 TAX1BP1Q86VP1 789 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 KCNJ15Q99712 375 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 PDGFDQ9GZP0 370 aaPredicted RBP6.04□□□□□ -1.44
USP47-211ENST00000531513 CHPF2Q9P2E5 772 aa6.04□□□□□ -1.44
USP47-211ENST00000531513 PRODHO43272 600 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
USP47-211ENST00000531513 SPIRE1Q08AE8 756 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 KIZQ2M2Z5 673 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 NRN1LQ496H8 165 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 IGFL4Q6B9Z1 124 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 DHX37Q8IY37 1157 aaKnown RBP6.03□□□□□ -1.44
USP47-211ENST00000531513 NIM1KQ8IY84 436 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 FUKQ8N0W3 1084 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 DCAF4Q8WV16 495 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 MFSD3Q96ES6 412 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 DSEQ9UL01 958 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
USP47-211ENST00000531513 MYCLP1P12525 358 aaPredicted RBP6.02□□□□□ -1.45
USP47-211ENST00000531513 COMTP21964 271 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 CNGA1P29973 690 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 FHL2Q14192 279 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 ZNF568Q3ZCX4 644 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
USP47-211ENST00000531513 STYK1Q6J9G0 422 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 NSMFQ6X4W1 530 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 KCTD1Q719H9 257 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 PRPF38AQ8NAV1 312 aaKnown RBP6.02□□□□□ -1.45
USP47-211ENST00000531513 CHAC2Q8WUX2 184 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 ZNF503Q96F45 646 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 ZFYVE21Q9BQ24 234 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 POLR3GLQ9BT43 218 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms