RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PAGE5Q96GU1 130 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 TIGD1Q96MW7 591 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 SH2D3AQ9BRG2 576 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 XPNPEP3Q9NQH7 507 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 SYNRGQ9UMZ2 1314 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 IGSF9BQ9UPX0 1349 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 DKC1O60832 514 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 PPFIA4O75335 1185 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 LGALS2P05162 132 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 MYL3P08590 195 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 PLA2G4BP0C869 781 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 MUTP22033 750 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CHMP4BP1P59074 171 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 FSCN1Q16658 493 aaKnown RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CCDC183Q5T5S1 534 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 PLA2G4FQ68DD2 849 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 C4orf19Q8IY42 314 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 LARP4BQ92615 738 aaKnown RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 ERCC4Q92889 916 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 GZF1Q9H116 711 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 UNC93B1Q9H1C4 597 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 BHMT2Q9H2M3 363 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 TNMDQ9H2S6 317 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 SMARCAD1Q9H4L7 1026 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 SPC25Q9HBM1 224 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 MAFBQ9Y5Q3 323 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 A6NJR5 290 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 ATP4AP20648 1035 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CASP1P29466 404 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CPT1AP50416 773 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 BRDTQ58F21 947 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 GNASQ5JWF2 1037 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 FBXO46Q6PJ61 603 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 SV2BQ7L1I2 683 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 SYAP1Q96A49 352 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 BLZF1Q9H2G9 400 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CUEDC2Q9H467 287 aa21.26■□□□□ 0.99
SMPD1-205ENST00000531303 SEPT9Q9UHD8 586 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-205ENST00000531303 CTAGE5O15320 804 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 EYA4O95677 639 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 PRR29P0C7W0 189 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 GJA9P57773 515 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 PNOCQ13519 176 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 MTFR1Q15390 333 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 AFAP1L1Q8TED9 768 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 CCDC43Q96MW1 224 aaKnown RBP21.25■□□□□ 0.99
SMPD1-205ENST00000531303 MTRQ99707 1265 aa21.25■□□□□ 0.99
SMPD1-205ENST00000531303 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.25■□□□□ 0.99
SMPD1-205ENST00000531303 EMSYQ7Z589 1322 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 HTTP42858 3142 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 CENPFP49454 3210 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 ARHGEF35A5YM69 484 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 STBD1O95210 358 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 LYPLA2O95372 231 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 OATP04181 439 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 NPEPPSP55786 919 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 XKR9Q5GH70 373 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 KANK3Q6NY19 840 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 ANO5Q75V66 913 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 PLPPR4Q7Z2D5 763 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 CCDC34Q96HJ3 373 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 UPF3AQ9H1J1 476 aaKnown RBP21.24■□□□□ 0.99
SMPD1-205ENST00000531303 KBTBD4Q9NVX7 518 aa21.24■□□□□ 0.99
SMPD1-205ENST00000531303 HOOK1Q9UJC3 728 aaKnown RBP21.24■□□□□ 0.99
SMPD1-205ENST00000531303 POSTNQ15063 836 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 PLCB4Q15147 1175 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 XKR3Q5GH77 459 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 OTUD6AQ7L8S5 288 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 GPBP1Q86WP2 473 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 C16orf70Q9BSU1 422 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 NRBP2Q9NSY0 501 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 ERAP1Q9NZ08 941 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 TRPC6Q9Y210 931 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 LOXHD1Q8IVV2 1947 aa21.23■□□□□ 0.99
SMPD1-205ENST00000531303 NPHP3-ACAD11A0A0J9YXS1 232 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 H3BRB1 525 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 CCL5P13501 91 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 SLC12A3P55017 1021 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 RAD51AP2Q09MP3 1159 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 CUL4BQ13620 913 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 PKN2Q16513 984 aaKnown RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 MTERF2Q49AM1 385 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 DYMQ7RTS9 669 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 SH3RF1Q7Z6J0 888 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 SYT2Q8N9I0 419 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 PPP1R13LQ8WUF5 828 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 CEP170P1Q96L14 293 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 RNPEPQ9H4A4 650 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 TUT1Q9H6E5 874 aaKnown RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 MAGEF1Q9HAY2 307 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 BMP2KQ9NSY1 1161 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 ANKEF1Q9NU02 776 aa21.22■□□□□ 0.99
SMPD1-205ENST00000531303 DBR1Q9UK59 544 aaKnown RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 ZNF215Q9UL58 517 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-205ENST00000531303 MYMKA6NI61 221 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 MSCO60682 206 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms