RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TRAPPC12Q8WVT3 735 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 PKD2L1Q9P0L9 805 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 UBIAD1Q9Y5Z9 338 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 DENND4AQ7Z401 1863 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 PRR23AA6NEV1 266 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 PROB1E7EW31 1015 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 NCK2O43639 380 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 EYA4O95677 639 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 INSRRP14616 1297 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 RXRAP19793 462 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 CHMLP26374 656 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 TRAF1Q13077 416 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 UBE2SQ16763 222 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 P2RX5Q93086 422 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 GPRASP2Q96D09 838 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 ERAP1Q9NZ08 941 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 IGSF9BQ9UPX0 1349 aa10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
CHMP4A-205ENST00000531158 RIF1Q5UIP0 2472 aaKnown RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 LOC730098B7Z3J9 87 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 STXBP3O00186 592 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 IGBP1P78318 339 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 COASYQ13057 564 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 TRDNQ13061 729 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 MTMR1Q13613 665 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 PAN2Q504Q3 1202 aaKnown RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 CMTR2Q8IYT2 770 aaKnown RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 EFHBQ8N7U6 833 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 CYP2W1Q8TAV3 490 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 SEPT1Q8WYJ6 367 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 PLVAPQ9BX97 442 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 PADI3Q9ULW8 664 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 BARX2Q9UMQ3 279 aaPredicted RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 C2orf16Q68DN1 1984 aa10.56□□□□□ -0.72
CHMP4A-205ENST00000531158 ERICH2A1L162 156 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 SGSM2O43147 1006 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 MGEA5O60502 916 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 DDAH1O94760 285 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 NRIP1P48552 1158 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 NDUFV1P49821 464 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 VCPP55072 806 aaKnown RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 TMEM266Q2M3C6 531 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 RALYLQ86SE5 291 aaKnown RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 RAB11FIP4Q86YS3 637 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 POF1BQ8WVV4 589 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 TMEM40Q8WWA1 233 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 GLG1Q92896 1179 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 MAP3K14Q99558 947 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 JADE2Q9NQC1 790 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 EPG5Q9HCE0 2579 aa10.55□□□□□ -0.72
CHMP4A-205ENST00000531158 SH2B2O14492 632 aaPredicted RBP10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 AVPR2P30518 371 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 DGLUCYQ7Z3D6 616 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 ADSSL1Q8N142 457 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 ATP8B4Q8TF62 1192 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 MAP4K1Q92918 833 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 CUL5Q93034 780 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 SMARCAD1Q9H4L7 1026 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 PSTPIP2Q9H939 334 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 JPH1Q9HDC5 661 aaPredicted RBP10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 KCNH7Q9NS40 1196 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 PCDHA2Q9Y5H9 948 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 TRPV2Q9Y5S1 764 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 RBM8AQ9Y5S9 174 aaKnown RBP10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 SQORQ9Y6N5 450 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 FAM186AA6NE01 2351 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 KDM3AQ9Y4C1 1321 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
CHMP4A-205ENST00000531158 BAHCC1Q9P281 2608 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms