RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SLC26A2P50443 739 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 GPM6BQ13491 265 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 MCTP2Q6DN12 878 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-205ENST00000531042 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
CPSF1-205ENST00000531042 C6orf50Q9HD87 102 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 TRPV2Q9Y5S1 764 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 TTC3P53804 2025 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 SMIM35A0A1B0GVV1 85 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 M0QZ92 97 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 REC8O95072 547 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 PSMA5P28066 241 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 CD52P31358 61 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 TMEM62Q0P6H9 643 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 NTRK3Q16288 839 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 PTPROQ16827 1216 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 FAM160B1Q5W0V3 765 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 MTHFD1LQ6UB35 978 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 REXO1Q8N1G1 1221 aaKnown RBP17.95■□□□□ 0.46
CPSF1-205ENST00000531042 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 PHKBQ93100 1093 aa17.95■□□□□ 0.46
CPSF1-205ENST00000531042 UBE2ZQ9H832 354 aaPredicted RBP17.95■□□□□ 0.46
CPSF1-205ENST00000531042 IPO5O00410 1097 aaKnown RBP17.94■□□□□ 0.46
CPSF1-205ENST00000531042 BACH1O14867 736 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 HBP1O60381 514 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 LINC00271P0C7V0 271 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 GNA11P29992 359 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 RTN4RL1Q86UN2 441 aaPredicted RBP17.94■□□□□ 0.46
CPSF1-205ENST00000531042 CCDC60Q8IWA6 550 aaPredicted RBP17.94■□□□□ 0.46
CPSF1-205ENST00000531042 NME8Q8N427 588 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 LINC01599Q8WXQ3 324 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 ZNF689Q96CS4 500 aaPredicted RBP17.94■□□□□ 0.46
CPSF1-205ENST00000531042 CELF4Q9BZC1 486 aaKnown RBP17.94■□□□□ 0.46
CPSF1-205ENST00000531042 BRWD1Q9NSI6 2320 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 ADGRA3Q8IWK6 1321 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 IGSF9BQ9UPX0 1349 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 KDM3AQ9Y4C1 1321 aa17.94■□□□□ 0.46
CPSF1-205ENST00000531042 C5orf67F2Z3F1 127 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 KLRC1P26715 233 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 EVCP57679 992 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 SETQ01105 290 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-205ENST00000531042 AKAP17AQ02040 695 aaKnown RBP17.93■□□□□ 0.46
CPSF1-205ENST00000531042 SWSAP1Q6NVH7 229 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 MIS18BP1Q6P0N0 1132 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 PDXDC2PQ6P474 469 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 UIMC1Q96RL1 719 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 ZNF577Q9BSK1 485 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 RNF26Q9BY78 433 aaPredicted RBP17.93■□□□□ 0.46
CPSF1-205ENST00000531042 ZNF302Q9NR11 478 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 TBC1D22BQ9NU19 505 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 PADI3Q9ULW8 664 aa17.93■□□□□ 0.46
CPSF1-205ENST00000531042 DGKIO75912 1065 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 RB1P06400 928 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 IFNAR1P17181 557 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 ATP4AP20648 1035 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
CPSF1-205ENST00000531042 CTNNB1P35222 781 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 BMPR1AP36894 532 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 KRT76Q01546 638 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 LEXMQ3ZCV2 418 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 TIGD5Q53EQ6 642 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 ZNF484Q5JVG2 852 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 CRIPAKQ8N1N5 446 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 BANK1Q8NDB2 785 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 BICD2Q8TD16 824 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 CLP1Q92989 425 aaKnown RBP17.92■□□□□ 0.46
CPSF1-205ENST00000531042 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 RWDD3Q9Y3V2 267 aa17.92■□□□□ 0.46
CPSF1-205ENST00000531042 COL1A2P08123 1366 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 EPB41L2O43491 1005 aaKnown RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 KCNA5P22460 613 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 CIITAP33076 1130 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 CCT2P78371 535 aaKnown RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 PAK2Q13177 524 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 ZNF746Q6NUN9 644 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 KIAA0319LQ8IZA0 1049 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 CCDC148Q8NFR7 591 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 RASGRP4Q8TDF6 673 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 MAFBQ9Y5Q3 323 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 MYH9P35579 1960 aaKnown RBP17.91■□□□□ 0.46
CPSF1-205ENST00000531042 EVPLQ92817 2033 aa17.91■□□□□ 0.46
CPSF1-205ENST00000531042 ATG2AQ2TAZ0 1938 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 PRR16Q569H4 304 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 TCEAL5Q5H9L2 206 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 NPAS4Q8IUM7 802 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 SMAP1Q8IYB5 467 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-205ENST00000531042 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-205ENST00000531042 BBXQ8WY36 941 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-205ENST00000531042 C11orf84Q9BUA3 381 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-205ENST00000531042 TMX1Q9H3N1 280 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 NSUN3Q9H649 340 aaKnown RBP17.9■□□□□ 0.46
CPSF1-205ENST00000531042 ZSWIM6Q9HCJ5 1215 aa17.9■□□□□ 0.46
CPSF1-205ENST00000531042 VPS54Q9P1Q0 977 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms