RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 MBLAC1A4D2B0 266 aaPredicted RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 HBP1O60381 514 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 IQCF3P0C7M6 154 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 ACRP10323 421 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 TOB1P50616 345 aaPredicted RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 TRAF7Q6Q0C0 670 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 LRRC8DQ7L1W4 858 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 BANK1Q8NDB2 785 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
LTBP3-219ENST00000530990 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 GBF1Q92538 1859 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
LTBP3-219ENST00000530990 COL1A2P08123 1366 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 RRN3P2A6NIE6 340 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 OATP04181 439 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 CTSHP09668 335 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 SELPP16109 830 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 PDCP20941 246 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 THPOP40225 353 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 TXKP42681 527 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 SHHQ15465 462 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 ZNF618Q5T7W0 954 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
LTBP3-219ENST00000530990 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
LTBP3-219ENST00000530990 IL23AQ9NPF7 189 aa13.36□□□□□ -0.27
LTBP3-219ENST00000530990 MICAL3Q7RTP6 2002 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 POTEMA6NI47 508 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 SYT1P21579 422 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 TAF2Q6P1X5 1199 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 DEFB128Q7Z7B8 93 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 FERMT3Q86UX7 667 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 TNPO1Q92973 898 aaKnown RBP13.35□□□□□ -0.27
LTBP3-219ENST00000530990 WRAP73Q9P2S5 460 aaPredicted RBP13.35□□□□□ -0.27
LTBP3-219ENST00000530990 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
LTBP3-219ENST00000530990 NBNO60934 754 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 CAND2O75155 1236 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 STBD1O95210 358 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 C22orf31O95567 290 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 KLRC1P26715 233 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 RFC2P35250 354 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 PSMC5P62195 406 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 GPNMBQ14956 572 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 EPHA7Q15375 998 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 PSRC1Q6PGN9 363 aaPredicted RBP13.34□□□□□ -0.27
LTBP3-219ENST00000530990 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 DNAJB3Q8WWF6 145 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 DYDC2Q96IM9 177 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 LXNQ9BS40 222 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 FAM49AQ9H0Q0 323 aaPredicted RBP13.34□□□□□ -0.27
LTBP3-219ENST00000530990 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
LTBP3-219ENST00000530990 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
LTBP3-219ENST00000530990 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
LTBP3-219ENST00000530990 SZT2Q5T011 3432 aa13.33□□□□□ -0.27
LTBP3-219ENST00000530990 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 P4HBP07237 508 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 PFKMP08237 780 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 RSPH10BP0C881 870 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 TECP42680 631 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 PTGDRQ13258 359 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 CTTNQ14247 550 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
LTBP3-219ENST00000530990 SH2D3AQ9BRG2 576 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
LTBP3-219ENST00000530990 SMIM35A0A1B0GVV1 85 aa13.32□□□□□ -0.28
LTBP3-219ENST00000530990 SOX1O00570 391 aaPredicted RBP13.32□□□□□ -0.28
LTBP3-219ENST00000530990 STX6O43752 255 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms