RNA–Protein interactions for RNA: ENST00000530630.1

NUP214-222, Transcript of nucleoporin 214, human

TSL 3

Gene NUP214, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-222	ENST00000530630	USP15	Q9Y4E8	981 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP214-222	ENST00000530630	TRPV2	Q9Y5S1	764 aa		13.29	□□□□□ -0.28
NUP214-222	ENST00000530630	DDAH1	O94760	285 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PLEKHA8P1	O95397	391 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	STAG3L1	P0CL83	205 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	SCG2	P13521	617 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	TMEM62	Q0P6H9	643 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	TCF15	Q12870	199 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PAK2	Q13177	524 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PKN1	Q16512	942 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	UBE2S	Q16763	222 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	RBM23	Q86U06	439 aa	Known RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	SRBD1	Q8N5C6	995 aa	Known RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	CTCFL	Q8NI51	663 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PRRX2	Q99811	253 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PHF7	Q9BWX1	381 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PSTPIP2	Q9H939	334 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	JADE2	Q9NQC1	790 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PKD2L1	Q9P0L9	805 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	SEC63	Q9UGP8	760 aa	Known RBP	13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	PCDHA2	Q9Y5H9	948 aa		13.28	□□□□□ -0.28
NUP214-222	ENST00000530630	MYO15A	Q9UKN7	3530 aa		13.27	□□□□□ -0.28
NUP214-222	ENST00000530630	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.27	□□□□□ -0.28
NUP214-222	ENST00000530630		M0QZ92	97 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	MGEA5	O60502	916 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	KIF5B	P33176	963 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	RBM10	P98175	930 aa	Known RBP	13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	SUGP1	Q8IWZ8	645 aa	Known RBP	13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	FBXL6	Q8N531	539 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	VN1R2	Q8NFZ6	395 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	TRAPPC12	Q8WVT3	735 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	SUSD6	Q92537	303 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	ASIC4	Q96FT7	647 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	SNX27	Q96L92	541 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	CELF4	Q9BZC1	486 aa	Known RBP	13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	JPH1	Q9HDC5	661 aa	Predicted RBP	13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	SLC9A2	Q9UBY0	812 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	KDM3A	Q9Y4C1	1321 aa		13.27	□□□□□ -0.29
NUP214-222	ENST00000530630	MAFG	O15525	162 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	ATF7	P17544	494 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	CHML	P26374	656 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	PDE4A	P27815	886 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	SARS	P49591	514 aa	Known RBP	13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	UBE3A	Q05086	875 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	PLCB4	Q15147	1175 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	TMEM266	Q2M3C6	531 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	TTC22	Q5TAA0	569 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	CMTR1	Q8N1G2	835 aa	Known RBP	13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	ATP8B4	Q8TF62	1192 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	LZTS2	Q9BRK4	669 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	TLE6	Q9H808	572 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	PCDHA6	Q9UN73	950 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	TRPC6	Q9Y210	931 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	PCDHA8	Q9Y5H6	950 aa		13.26	□□□□□ -0.29
NUP214-222	ENST00000530630	VPS13A	Q96RL7	3174 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	SMIM35	A0A1B0GVV1	85 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	PER2	O15055	1255 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	ST18	O60284	1047 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	PPFIA3	O75145	1194 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	GNAQ	P50148	359 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	VCP	P55072	806 aa	Known RBP	13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	ACTR2	P61160	394 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	KRT76	Q01546	638 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	SIGLEC14	Q08ET2	396 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	DUSP6	Q16828	381 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	PLPPR4	Q7Z2D5	763 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	RUFY2	Q8WXA3	655 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	TNPO1	Q92973	898 aa	Known RBP	13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	RPGRIP1	Q96KN7	1286 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	AZI2	Q9H6S1	392 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	ERVK-5	Q9HDB9	667 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	TLR9	Q9NR96	1032 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	KCNH7	Q9NS40	1196 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	HCST	Q9UBK5	93 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	LRFN2	Q9ULH4	789 aa		13.25	□□□□□ -0.29
NUP214-222	ENST00000530630	NFASC	O94856	1347 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	hCG_1642624	A0A1W2PR95	340 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	SPDYE3	A6NKU9	549 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	SGSM2	O43147	1006 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	FGF18	O76093	207 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	ERVFC1	P60507	584 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	NFX1	Q12986	1120 aa	Known RBP	13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	KCNC3	Q14003	757 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	COL9A3	Q14050	684 aa	Predicted RBP	13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	MTHFD1L	Q6UB35	978 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	NME8	Q8N427	588 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	CYP2W1	Q8TAV3	490 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	TMEM40	Q8WWA1	233 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	MAP4K1	Q92918	833 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	CDCA3	Q99618	268 aa	Predicted RBP	13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	MXRA8	Q9BRK3	442 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	MTA3	Q9BTC8	594 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	CDHR5	Q9HBB8	845 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	PCDHB7	Q9Y5E2	793 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	PCDHB12	Q9Y5F1	795 aa		13.24	□□□□□ -0.29
NUP214-222	ENST00000530630	FSD2	A1L4K1	749 aa		13.23	□□□□□ -0.29
NUP214-222	ENST00000530630	TBKBP1	A7MCY6	615 aa		13.23	□□□□□ -0.29
NUP214-222	ENST00000530630		C9IYK1	514 aa		13.23	□□□□□ -0.29
NUP214-222	ENST00000530630	SH2B2	O14492	632 aa	Predicted RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms