RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 MYMKA6NI61 221 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 E9PMD0 336 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 DDX39AO00148 427 aaKnown RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 FARP2O94887 1054 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 SPATA31C1P0DKV0 1188 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 PTGS1P23219 599 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 CYP4A11Q02928 519 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 KMT5BQ4FZB7 885 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 METTL7BQ6UX53 244 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 JPH1Q9HDC5 661 aaPredicted RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 KIAA1217Q5T5P2 1943 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 SORBS3O60504 671 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 GH1P01241 217 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 TPM4P67936 248 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 CCDC47Q96A33 483 aaKnown RBP16.05■□□□□ 0.16
TTC39A-216ENST00000530004 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 SLC9A2Q9UBY0 812 aa16.05■□□□□ 0.16
TTC39A-216ENST00000530004 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 RHOBTB3O94955 611 aa16.04■□□□□ 0.16
TTC39A-216ENST00000530004 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
TTC39A-216ENST00000530004 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
TTC39A-216ENST00000530004 LAMC2Q13753 1193 aa16.04■□□□□ 0.16
TTC39A-216ENST00000530004 CT47A1Q5JQC4 288 aaPredicted RBP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
TTC39A-216ENST00000530004 Q9Y3F1 56 aa16.04■□□□□ 0.16
TTC39A-216ENST00000530004 PPP1R3GB7ZBB8 358 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 CCNE2O96020 404 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 KRT76Q01546 638 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 EPHA7Q15375 998 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 MTFR1Q15390 333 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 ARMC5Q96C12 935 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 DYDC2Q96IM9 177 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 EXOC1Q9NV70 894 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 GDAQ9Y2T3 454 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 MSCO60682 206 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 SLITRK3O94933 977 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 RARBP10826 455 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 PSMC6P62333 389 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 SP4Q02446 784 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 HSDL1Q3SXM5 330 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 ZNF746Q6NUN9 644 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 SARM1Q6SZW1 724 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 OR6J1Q8NGC5 347 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 ENOX1Q8TC92 643 aaKnown RBP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 DDX12PQ92771 950 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 SPATA33Q96N06 139 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 TRIM5Q9C035 493 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.16
TTC39A-216ENST00000530004 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 TELO2Q9Y4R8 837 aa16.03■□□□□ 0.16
TTC39A-216ENST00000530004 SLC12A3P55017 1021 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 ACTR2P61160 394 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 UNC13DQ70J99 1090 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 MIER3Q7Z3K6 550 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 TPH2Q8IWU9 490 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 SMAP1Q8IYB5 467 aaPredicted RBP16.02■□□□□ 0.15
TTC39A-216ENST00000530004 MCOLN1Q9GZU1 580 aa16.02■□□□□ 0.15
TTC39A-216ENST00000530004 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.15
TTC39A-216ENST00000530004 PVALEFA0A1B0GWK0 134 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 NOP56O00567 594 aaKnown RBP16.01■□□□□ 0.15
TTC39A-216ENST00000530004 MYCP01106 439 aaPredicted RBP16.01■□□□□ 0.15
TTC39A-216ENST00000530004 CCL5P13501 91 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 SFNP31947 248 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 KCTD17Q8N5Z5 321 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 PPTC7Q8NI37 304 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 AFG1LQ8WV93 481 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 MED15Q96RN5 788 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 GPR20Q99678 358 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 AP5M1Q9H0R1 490 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 HSD3B7Q9H2F3 369 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 PAK6Q9NQU5 681 aaPredicted RBP16.01■□□□□ 0.15
TTC39A-216ENST00000530004 CTNND2Q9UQB3 1225 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 CENPFP49454 3210 aa16.01■□□□□ 0.15
TTC39A-216ENST00000530004 WDR64B1ANS9 1081 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms