RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SAMM50Q9Y512 469 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
TSPAN4-218ENST00000529566 HBP1O60381 514 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 CAND2O75155 1236 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 STBD1O95210 358 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 FGBP02675 491 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 PFKMP08237 780 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 IGBP1P78318 339 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 FAM26DQ5JW98 314 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 TAF2Q6P1X5 1199 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 MIER3Q7Z3K6 550 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 TNPO1Q92973 898 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 OSBPL7Q9BZF2 842 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 CXXC1Q9P0U4 656 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 SMC3Q9UQE7 1217 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 TANC1Q9C0D5 1861 aa18.18■□□□□ 0.5
TSPAN4-218ENST00000529566 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 RSPH10B2B2RC85 870 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 TOB1P50616 345 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 TCTN1Q2MV58 587 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 MTHFD1LQ6UB35 978 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 SLFN12Q8IYM2 578 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 TMEM60Q9H2L4 133 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
TSPAN4-218ENST00000529566 NEMFO60524 1076 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 CHRNA1P02708 482 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 ATP2B1P20020 1258 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 CALCRLQ16602 461 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 ZNF484Q5JVG2 852 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 FAM109BQ6ICB4 259 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 OTOP2Q7RTS6 562 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 SNX21Q969T3 373 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 MYH9P35579 1960 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 COL1A2P08123 1366 aa18.16■□□□□ 0.5
TSPAN4-218ENST00000529566 BAG4O95429 457 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 OATP04181 439 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 KLRC1P26715 233 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 MCM7P33993 719 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 TRAPPC10P48553 1259 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 PRKCEQ02156 737 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 MGAT3Q09327 533 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 DNAJB3Q8WWF6 145 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 FAM167AQ96KS9 214 aa18.15■□□□□ 0.5
TSPAN4-218ENST00000529566 SMIM35A0A1B0GVV1 85 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 C22orf31O95567 290 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 CTSHP09668 335 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 ORC2Q13416 577 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 EPHA7Q15375 998 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 TARBP2Q15633 366 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 ZNF174Q15697 407 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 TTC38Q5R3I4 469 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 LARP1BQ659C4 914 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 TRMT1LQ7Z2T5 733 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 KIAA0319LQ8IZA0 1049 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 BANK1Q8NDB2 785 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 NIFKQ9BYG3 293 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 NRBP2Q9NSY0 501 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 WRAP73Q9P2S5 460 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 PCDHA12Q9UN75 941 aa18.14■□□□□ 0.49
TSPAN4-218ENST00000529566 MARCH6O60337 910 aa18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 PSMC5P62195 406 aa18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 SMAD3P84022 425 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 GNL2Q13823 731 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 NBR1Q14596 966 aa18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 LINC01465Q8N7H1 131 aa18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 FAM49AQ9H0Q0 323 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 TTC12Q9H892 705 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-218ENST00000529566 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 TMEM150BA6NC51 233 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 P4HBP07237 508 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 TXKP42681 527 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 QARSP47897 775 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 MRPS6P82932 125 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 XKR3Q5GH77 459 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 NCAPH2Q6IBW4 605 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 CNKSR3Q6P9H4 555 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 ANO5Q75V66 913 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 NME8Q8N427 588 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 HSD17B14Q9BPX1 270 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 RGL1Q9NZL6 768 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 PCDHB6Q9Y5E3 794 aa18.12■□□□□ 0.49
TSPAN4-218ENST00000529566 GRXCR1A8MXD5 290 aa18.11■□□□□ 0.49
TSPAN4-218ENST00000529566 H3BQV1 296 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms