RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 CGNL1Q0VF96 1302 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 BIVM-ERCC5R4GMW8 1640 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KTN1Q86UP2 1357 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PHLDB1Q86UU1 1377 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RAB3GAP2Q9H2M9 1393 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 FMN1Q68DA7 1419 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CCDC18Q5T9S5 1454 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SYNJ1O43426 1573 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SYNJ2BP-COX16A0A087WUM0 186 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 UQCRHLA0A096LP55 91 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 FAM221AA4D161 298 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 LRRC72A6NJI9 287 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TSPY2A6NKD2 308 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 LACTBL1A8MY62 500 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ALG1L2C9J202 215 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 F8W031 263 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 INO80B-WBP1J3KQ70 363 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 FSCN2O14926 492 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 POLR3GO15318 223 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SGSM2O43147 1006 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 FZD6O60353 706 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SORBS3O60504 671 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ZBED4O75132 1171 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 XYLBO75191 536 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 USP2O75604 605 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SNX4O95219 450 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PDGFAP04085 211 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 UQCRHP07919 91 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 IFIT1P09914 478 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TSPY3P0CV98 308 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TSPY8P0CW00 308 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CAPN3P20807 821 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 MAP4P27816 1152 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PMLP29590 882 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CNGA1P29973 690 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CDC25BP30305 580 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SOX18P35713 384 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 HSD17B2P37059 387 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 POLD2P49005 469 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CCT8P50990 548 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 NEK2P51955 445 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 RRP1P56182 461 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TSPY1Q01534 308 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PLCB3Q01970 1234 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 RELQ04864 619 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 EHHADHQ08426 723 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 GRIK3Q13003 919 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PRKG2Q13237 762 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 MPP3Q13368 585 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PICALMQ13492 652 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 MLC1Q15049 377 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ANKRD1Q15327 319 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ELF2Q15723 593 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CPSF6Q16630 551 aaKnown RBP eCLIP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SETMARQ53H47 684 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SH2D4BQ5SQS7 431 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TTC39AQ5SRH9 613 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 INTS11Q5TA45 600 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 EMC10Q5UCC4 262 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 METTL11BQ5VVY1 283 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ANKRD34AQ69YU3 496 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 FAM180BQ6P0A1 224 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 KDELC1Q6UW63 502 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 DSTYKQ6XUX3 929 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ARHGAP27Q6ZUM4 889 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TMC4Q7Z404 712 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SPATA21Q7Z572 469 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 RALYLQ86SE5 291 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TBC1D1Q86TI0 1168 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CILP2Q8IUL8 1156 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SPATA2LQ8IUW3 424 aaPredicted RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 FAM114A1Q8IWE2 563 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CCAR2Q8N163 923 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 AFAP1Q8N556 730 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 NKAPQ8N5F7 415 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 AADATQ8N5Z0 425 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TRIML2Q8N7C3 387 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 AGBL5Q8NDL9 886 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PJA1Q8NG27 643 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 GIMAP7Q8NHV1 300 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 PI4K2BQ8TCG2 481 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 MIPOL1Q8TD10 442 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ANKRD7Q92527 254 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TIFAQ96CG3 184 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CCDC114Q96M63 670 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 CEP295NLQ96MC4 621 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 C7orf25Q9BPX7 421 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ELAC2Q9BQ52 826 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 DESI2Q9BSY9 194 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SARGQ9BW04 601 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 OSBPL1AQ9BXW6 950 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TSGA10Q9BZW7 698 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 ELAC1Q9H777 363 aaKnown RBP3.1□□□□□ -1.91
FDFT1-216ENST00000529521 MRS2Q9HD23 443 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 AASDHPPTQ9NRN7 309 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 RASSF1Q9NS23 344 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 TOMM22Q9NS69 142 aa3.1□□□□□ -1.91
FDFT1-216ENST00000529521 SPATS2LQ9NUQ6 558 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms