RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 AHI1Q8N157 1196 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 AFAP1L2Q8N4X5 818 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 STPG3Q8N7X2 389 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 BHLHE22Q8NFJ8 381 aaPredicted RBP6.62□□□□□ -1.35
CTR9-204ENST00000529355 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
CTR9-204ENST00000529355 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 GBP4Q96PP9 640 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 TACO1Q9BSH4 297 aaKnown RBP6.62□□□□□ -1.35
CTR9-204ENST00000529355 ZKSCAN5Q9Y2L8 839 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 H7C1D1 291 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 GAS7O60861 476 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 DNAJC6O75061 913 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 HIP1RO75146 1068 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 FKBP9O95302 570 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 ENO2P09104 434 aaPredicted RBP6.61□□□□□ -1.35
CTR9-204ENST00000529355 GJA4P35212 333 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 AFF3P51826 1226 aaKnown RBP6.61□□□□□ -1.35
CTR9-204ENST00000529355 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 FKBP9P1Q75LS8 142 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 SAPCD2Q86UD0 394 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 KIF18BQ86Y91 864 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 SEMA4AQ9H3S1 761 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 SPC25Q9HBM1 224 aa6.61□□□□□ -1.35
CTR9-204ENST00000529355 EYA4O95677 639 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 COL6A1P12109 1028 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 BPIP17213 487 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 CNGA1P29973 690 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 SDHAP31040 664 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 EVA1CP58658 441 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 IL2P60568 153 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 AMPD3Q01432 767 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
CTR9-204ENST00000529355 LILRA6Q6PI73 481 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 RTN4RL1Q86UN2 441 aaPredicted RBP6.6□□□□□ -1.35
CTR9-204ENST00000529355 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
CTR9-204ENST00000529355 OR2W6PQ8NHA6 318 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 ZCCHC14Q8WYQ9 949 aaKnown RBP6.6□□□□□ -1.35
CTR9-204ENST00000529355 VTA1Q9NP79 307 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 ARHGAP28Q9P2N2 729 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 ZFP69BQ9UJL9 534 aa6.6□□□□□ -1.35
CTR9-204ENST00000529355 ADAMTS20P59510 1910 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 B8ZZF3 427 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 GOLGA6L22H0YM25 854 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 DDX3XO00571 662 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTR9-204ENST00000529355 PTGS1P23219 599 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 HERVK_113P62684 666 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 NFKB2Q00653 900 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 LCNL1Q6ZST4 164 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 HIPK4Q8NE63 616 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
CTR9-204ENST00000529355 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 SPATA25Q9BR10 227 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 EMC7Q9NPA0 242 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
CTR9-204ENST00000529355 DLL4Q9NR61 685 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 ARHGAP20Q9P2F6 1191 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
CTR9-204ENST00000529355 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 IL13P35225 146 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 SOX5P35711 763 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 KPNA1P52294 538 aaPredicted RBP6.58□□□□□ -1.36
CTR9-204ENST00000529355 SMAD3P84022 425 aaKnown RBP6.58□□□□□ -1.36
CTR9-204ENST00000529355 DHCR24Q15392 516 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 ZNF174Q15697 407 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 SMAD2Q15796 467 aaKnown RBP6.58□□□□□ -1.36
CTR9-204ENST00000529355 TAF7LQ5H9L4 462 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 DDX42Q86XP3 938 aaKnown RBP eCLIP6.58□□□□□ -1.36
CTR9-204ENST00000529355 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 IGDCC4Q8TDY8 1250 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 TMEM209Q96SK2 561 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 PCIF1Q9H4Z3 704 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 KCND1Q9NSA2 647 aa6.58□□□□□ -1.36
CTR9-204ENST00000529355 RFXAPO00287 272 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 LSSP48449 732 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 RGS3P49796 1198 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
CTR9-204ENST00000529355 IL13RA1P78552 427 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 STAT4Q14765 748 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 SART3Q15020 963 aaKnown RBP6.57□□□□□ -1.36
CTR9-204ENST00000529355 CT47A1Q5JQC4 288 aaPredicted RBP6.57□□□□□ -1.36
CTR9-204ENST00000529355 RNF187Q5TA31 235 aaPredicted RBP6.57□□□□□ -1.36
CTR9-204ENST00000529355 CIAPIN1Q6FI81 312 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 CMIPQ8IY22 773 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 TTLL6Q8N841 843 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 COG1Q8WTW3 980 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 USP7Q93009 1102 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 CLIC6Q96NY7 704 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 INCENPQ9NQS7 918 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 GALNT8Q9NY28 637 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 MAGEL2Q9UJ55 1249 aa6.57□□□□□ -1.36
CTR9-204ENST00000529355 ZNF28P17035 718 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms