RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MAGEB10Q96LZ2 347 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 NOX5Q96PH1 765 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 ALG1Q9BT22 464 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 CELF4Q9BZC1 486 aaKnown RBP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 EPB41L1Q9H4G0 881 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 DHX29Q7Z478 1369 aaKnown RBP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 PLA2R1Q13018 1463 aa6.77□□□□□ -1.33
CSDE1-212ENST00000529046 INO80Q9ULG1 1556 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-212ENST00000529046 A0A087X0B3 334 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 A0A1B0GTL3 188 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 FAM47E-STBD1D6RA91 191 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 VIL1P09327 827 aaKnown RBP6.76□□□□□ -1.33
CSDE1-212ENST00000529046 IGFALSP35858 605 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 DLX2Q07687 328 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-212ENST00000529046 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 RELTQ969Z4 430 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 ZBTB8AQ96BR9 441 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 IPPKQ9H8X2 491 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 PCDH18Q9HCL0 1135 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 PRKAB1Q9Y478 270 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 PTPRKQ15262 1439 aa6.76□□□□□ -1.33
CSDE1-212ENST00000529046 TIAM1Q13009 1591 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 SBNO2Q9Y2G9 1366 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 B4E1Z4 1266 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 B8ZZF3 427 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 LACTBP83111 547 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-212ENST00000529046 CD300LDQ6UXZ3 194 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 MTDHQ86UE4 582 aaKnown RBP6.75□□□□□ -1.33
CSDE1-212ENST00000529046 ZC3H18Q86VM9 953 aaKnown RBP6.75□□□□□ -1.33
CSDE1-212ENST00000529046 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 SPATA25Q9BR10 227 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 SLC6A20Q9NP91 592 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 NTMQ9P121 344 aa6.75□□□□□ -1.33
CSDE1-212ENST00000529046 TNPO3Q9Y5L0 923 aaKnown RBP6.75□□□□□ -1.33
CSDE1-212ENST00000529046 ADGBQ8N7X0 1667 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 TCOF1Q13428 1488 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 GSG1L2A8MUP6 293 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 HGSO14964 777 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 DGKIO75912 1065 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 SMAD4Q13485 552 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 STEAP3Q658P3 488 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 GGT6Q6P531 493 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 LRRTM3Q86VH5 581 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 CARFQ8N187 725 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 FAM26EQ8N5C1 309 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 UHMK1Q8TAS1 419 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 DDX1Q92499 740 aaKnown RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 FBXW5Q969U6 566 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 GORASP1Q9BQQ3 440 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 LTBP4Q8N2S1 1624 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 MAP3K1Q13233 1512 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 NCANO14594 1321 aa6.74□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF644Q9H582 1327 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-212ENST00000529046 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 PRRG2O14669 202 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 TSPY4P0CV99 314 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 TSPY10P0CW01 314 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 MASP1P48740 699 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 EPHA5P54756 1037 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF460Q14592 562 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF662Q6ZS27 426 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 TTLL7Q6ZT98 887 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 OTOP1Q7RTM1 612 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 FRMD5Q7Z6J6 570 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 C11orf84Q9BUA3 381 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-212ENST00000529046 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 ADAM7Q9H2U9 754 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
CSDE1-212ENST00000529046 USP40Q9NVE5 1235 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 SPATA6Q9NWH7 488 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-212ENST00000529046 CBLCQ9ULV8 474 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 NCOA2Q15596 1464 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 CCDC141Q6ZP82 1450 aa6.73□□□□□ -1.33
CSDE1-212ENST00000529046 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-212ENST00000529046 FOXD2O60548 495 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-212ENST00000529046 CLSTN1O94985 981 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SYN1P17600 705 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 STAT5AP42229 794 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SARSP49591 514 aaKnown RBP6.72□□□□□ -1.33
CSDE1-212ENST00000529046 C21orf62-AS1Q17RA5 79 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 NT5DC1Q5TFE4 455 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 RNF180Q86T96 592 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 KIF18BQ86Y91 864 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 DHX37Q8IY37 1157 aaKnown RBP6.72□□□□□ -1.33
CSDE1-212ENST00000529046 KYQ8NBH2 561 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 CXorf38Q8TB03 319 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms