RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 VWA5B2Q8N398 1253 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 OR6J1Q8NGC5 347 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 CTCFLQ8NI51 663 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 PRUNE2Q8WUY3 3088 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 KCNB2Q92953 911 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 TAAR1Q96RJ0 339 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 PIGSQ96S52 555 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 PDCD2LQ9BRP1 358 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 MTG1Q9BT17 334 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 TMEM265A0A087WTH1 108 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 GCOM1H8Y6P7 765 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 STAM2O75886 525 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 CFBP00751 764 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 GH1P01241 217 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 F11P03951 625 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 MMP3P08254 477 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 POLR2MP0CAP2 368 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 EIF2AK2P19525 551 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 EPHB4P54760 987 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 EXOSC10Q01780 885 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 PGM5Q15124 567 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 SHHQ15465 462 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 C9orf50Q5SZB4 431 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 RASIP1Q5U651 963 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 ARHGEF16Q5VV41 709 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 KCNV1Q6PIU1 500 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 TMTC3Q6ZXV5 915 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 SESTD1Q86VW0 696 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 HOMER1Q86YM7 354 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 PPTC7Q8NI37 304 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 GLMNQ92990 594 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 RRP36Q96EU6 259 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 CCDC136Q96JN2 1154 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 NOC4LQ9BVI4 516 aaKnown RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-218ENST00000528877 VAT1LQ9HCJ6 419 aa8.15□□□□□ -1.1
ITGB1-218ENST00000528877 CCDC69A6NI79 296 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 B4GALT4O60513 344 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 PLEKHA8P1O95397 391 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 F2P00734 622 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 SUPT20HL2P0C7V6 817 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 TGFB3P10600 412 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 RBL2Q08999 1139 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 XRRA1Q6P2D8 792 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 PSRC1Q6PGN9 363 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-218ENST00000528877 APOA5Q6Q788 366 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 VSIG10LQ86VR7 867 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 FBXL16Q8N461 479 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 TMEM199Q8N511 208 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 IL31RAQ8NI17 732 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 INPP4AQ96PE3 977 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-218ENST00000528877 NEK1Q96PY6 1258 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 MYL10Q9BUA6 226 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 HIPK3Q9H422 1215 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 SEC63Q9UGP8 760 aaKnown RBP8.14□□□□□ -1.11
ITGB1-218ENST00000528877 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
ITGB1-218ENST00000528877 PCDHGA11Q9Y5H2 935 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
ITGB1-218ENST00000528877 CNTNAP5Q8WYK1 1306 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 hCG_1984214I3L0E3 225 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 MEIS2O14770 477 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 PFKMP08237 780 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 CCND2P30279 289 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 HOXA13P31271 388 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 ICAM3P32942 547 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 HSPA4P34932 840 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 SMTNP53814 917 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 PSMC6P62333 389 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 LAMC2Q13753 1193 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 DGKDQ16760 1214 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 LY6KQ17RY6 165 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 ERICH6BQ5W0A0 696 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 PCNX4Q63HM2 1172 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 C16orf59Q7L2K0 433 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 DHX32Q7L7V1 743 aaKnown RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 SRBD1Q8N5C6 995 aaKnown RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 DEFB123Q8N688 67 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 ZNF713Q8N859 430 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 C1orf216Q8TAB5 229 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 AFG1LQ8WV93 481 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 KAT2BQ92831 832 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 COPS5Q92905 334 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 VTI1AQ96AJ9 217 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 RNPC3Q96LT9 517 aaKnown RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 KATNAL1Q9BW62 490 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 NIFKQ9BYG3 293 aaKnown RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms