RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PSMC6P62333 389 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FAM160A1Q05DH4 1040 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 E2F4Q16254 413 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NAALADL2Q58DX5 795 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RRAGBQ5VZM2 374 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FAM160B1Q5W0V3 765 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CCDC73Q6ZRK6 1079 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GPT2Q8TD30 523 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GLG1Q92896 1179 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ATP6V0A1Q93050 837 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CCDC39Q9UFE4 941 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 E9PMD0 336 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LYPLA2O95372 231 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MYL3P08590 195 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MUTP22033 750 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SYKP43405 635 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RGS19P49795 217 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PRKCEQ02156 737 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LRRC41Q15345 812 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 UBE2Q1Q7Z7E8 422 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KAT2BQ92831 832 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DHX58Q96C10 678 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NT5C3AQ9H0P0 336 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 BLOC1S4Q9NUP1 217 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TMEM150BA6NC51 233 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZNF202O95125 648 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MARK3P27448 753 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 STAT6P42226 847 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PURAQ00577 322 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
TRAF3IP2-211ENST00000528599 H3BRB1 525 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TRAK2O60296 914 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DKC1O60832 514 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 F2P00734 622 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KCNA10Q16322 511 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CXCL17Q6UXB2 119 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ANO5Q75V66 913 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RNF180Q86T96 592 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NACC1Q96RE7 527 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DACT1Q9NYF0 836 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ERAP1Q9NZ08 941 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MYH9P35579 1960 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KPNA6O60684 536 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 OATP04181 439 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ASGR1P07306 291 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SLC26A2P50443 739 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 XKR3Q5GH77 459 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PLA2G4FQ68DD2 849 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KCTD17Q8N5Z5 321 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 RAD54LQ92698 747 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
TRAF3IP2-211ENST00000528599 HAS3O00219 553 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ZEB2O60315 1214 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 EYA4O95677 639 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MBD3O95983 291 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 TFRCP02786 760 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 SLFN14P0C7P3 912 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 NPEPPSP55786 919 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MCM6Q14566 821 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 KRBA2Q6ZNG9 492 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PPP1R13LQ8WUF5 828 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MTRQ99707 1265 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 MTG1Q9BT17 334 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 BHMT2Q9H2M3 363 aa13.56□□□□□ -0.24
TRAF3IP2-211ENST00000528599 ANKEF1Q9NU02 776 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms