RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CALML4Q96GE6 196 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CHCHD3Q9NX63 227 aaKnown RBP13.56□□□□□ -0.24
TSKU-203ENST00000527881 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TNRQ92752 1358 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 DIP2BQ9P265 1576 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TLR2O60603 784 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CALM1P0DP23 149 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CALM2P0DP24 149 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CALM3P0DP25 149 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CYP7A1P22680 504 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CNGA1P29973 690 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 NPY5RQ15761 445 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 FAM47EQ6ZV65 393 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 GORASP1Q9BQQ3 440 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 GNAT2P19087 354 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 TECP42680 631 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 SETDB1Q15047 1291 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 ZNF449Q6P9G9 518 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 PABPC3Q9H361 631 aaKnown RBP13.55□□□□□ -0.24
TSKU-203ENST00000527881 GREM2Q9H772 168 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
TSKU-203ENST00000527881 MAP3K13O43283 966 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 BNIP1Q12981 228 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 ADAM9Q13443 819 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 SV2BQ7L1I2 683 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 DNAJC9Q8WXX5 260 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 TMEM59LQ9UK28 342 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSKU-203ENST00000527881 RNF8O76064 485 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 RCAN1P53805 252 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 FITM2Q8N6M3 262 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
TSKU-203ENST00000527881 GBP5Q96PP8 586 aa13.55□□□□□ -0.24
TSKU-203ENST00000527881 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
TSKU-203ENST00000527881 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 AGTP01019 485 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 KCNA6P17658 529 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 STX2P32856 288 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 SEC23AQ15436 765 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 TMEM237Q96Q45 408 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
TSKU-203ENST00000527881 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 RNPEPL1Q9HAU8 725 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 KCNMB3Q9NPA1 279 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 ECM29Q5VYK3 1845 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 NMT2O60551 498 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 FUT2Q10981 343 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 NELFCDQ8IXH7 590 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 SEMA4AQ9H3S1 761 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
TSKU-203ENST00000527881 CALB2P22676 271 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 ZNF211Q13398 564 aaPredicted RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 ALKBH5Q6P6C2 394 aaKnown RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 ZC3H18Q86VM9 953 aaKnown RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 PGM2Q96G03 612 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CETN3O15182 167 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 PPFIA2O75334 1257 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 ATP6V1C1P21283 382 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RASGRF1Q13972 1273 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RCN2Q14257 317 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CNGA2Q16280 664 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 HHATQ5VTY9 493 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 CCSER1Q9C0I3 900 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RXFP1Q9HBX9 757 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
TSKU-203ENST00000527881 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 RMDN2Q96LZ7 410 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
TSKU-203ENST00000527881 CREB3O43889 395 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 PDE8BO95263 885 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms