RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 MEIS2O14770 477 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 GRM6O15303 877 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 LINC01565O15544 149 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 PRC1O43663 620 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 GNAT1P11488 350 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 HOXC8P31273 242 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 NT5C2P49902 561 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 HYAL1Q12794 435 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 LPIN1Q14693 890 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 PAN2Q504Q3 1202 aaKnown RBP11.38□□□□□ -0.59
CAPN1-210ENST00000527699 NLRX1Q86UT6 975 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 MB21D2Q8IYB1 491 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-210ENST00000527699 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 SAMD3Q8N6K7 520 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 CTCFLQ8NI51 663 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-210ENST00000527699 TRAPPC12Q8WVT3 735 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 GLG1Q92896 1179 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 SEC63Q9UGP8 760 aaKnown RBP11.38□□□□□ -0.59
CAPN1-210ENST00000527699 CDY2AQ9Y6F7 541 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 MICAL3Q7RTP6 2002 aa11.38□□□□□ -0.59
CAPN1-210ENST00000527699 CCDC69A6NI79 296 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 ENPP3O14638 875 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 CD52P31358 61 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 GATMP50440 423 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 TRAF1Q13077 416 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-210ENST00000527699 GRIK4Q16099 956 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 PCNX4Q63HM2 1172 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-210ENST00000527699 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 CYP2W1Q8TAV3 490 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 PPP1R16BQ96T49 567 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 NLRC5Q86WI3 1866 aa11.37□□□□□ -0.59
CAPN1-210ENST00000527699 FRMPD4Q14CM0 1322 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 DDX39AO00148 427 aaKnown RBP11.36□□□□□ -0.59
CAPN1-210ENST00000527699 SGSM2O43147 1006 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 PPFIA3O75145 1194 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 KCNA2P16389 499 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 ITGB5P18084 799 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 ADAM17P78536 824 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 MGAT3Q09327 533 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 AAMPQ13685 434 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 BTG3Q14201 252 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-210ENST00000527699 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 TRMT1LQ7Z2T5 733 aaKnown RBP11.36□□□□□ -0.59
CAPN1-210ENST00000527699 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 DCLK2Q8N568 766 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 SEPT1Q8WYJ6 367 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 AGO3Q9H9G7 860 aaKnown RBP11.36□□□□□ -0.59
CAPN1-210ENST00000527699 PCDHA6Q9UN73 950 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 PCDHA8Q9Y5H6 950 aa11.36□□□□□ -0.59
CAPN1-210ENST00000527699 FLNBO75369 2602 aaKnown RBP11.36□□□□□ -0.59
CAPN1-210ENST00000527699 NRCAMQ92823 1304 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 STAM2O75886 525 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ZIC2O95409 532 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 INSRRP14616 1297 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 KIF5BP33176 963 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 BMPR1AP36894 532 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ATXN1P54253 815 aaKnown RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 MTMR1Q13613 665 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 MARCH8Q5T0T0 291 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 RBM23Q86U06 439 aaKnown RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 RTN4RL1Q86UN2 441 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 LINC01599Q8WXQ3 324 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 APBB2Q92870 758 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 TCEANC2Q96MN5 208 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 PCYT2Q99447 389 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-210ENST00000527699 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 TMEM260Q9NX78 707 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ZFYVE26Q68DK2 2539 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ATG2AQ2TAZ0 1938 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
CAPN1-210ENST00000527699 DCDC2BA2VCK2 349 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 SLC27A2O14975 620 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 CAND2O75155 1236 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 DDAH1O94760 285 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 LINC00271P0C7V0 271 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 SDHBP21912 280 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-210ENST00000527699 DNAJB1P25685 340 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 MRPS6P82932 125 aaKnown RBP11.34□□□□□ -0.59
CAPN1-210ENST00000527699 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 RSPH3Q86UC2 560 aa11.34□□□□□ -0.59
CAPN1-210ENST00000527699 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms