RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 ST13P5Q8NFI4 369 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-204ENST00000527586 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
VPS26B-204ENST00000527586 CCDC86Q9H6F5 360 aaKnown RBP8.31□□□□□ -1.08
VPS26B-204ENST00000527586 EHMT1Q9H9B1 1298 aa8.31□□□□□ -1.08
VPS26B-204ENST00000527586 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 TTC3P53804 2025 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 SPDYE4A6NLX3 237 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 TBKBP1A7MCY6 615 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CHURC1-FNTBB4DL54 471 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 LILRB3O75022 631 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CHRNA1P02708 482 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CSRP1P21291 193 aaKnown RBP8.3□□□□□ -1.08
VPS26B-204ENST00000527586 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CNR2P34972 360 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CDK8P49336 464 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 FNTBP49356 437 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 SNAP25P60880 206 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 ADCY1Q08828 1119 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 GLG1Q92896 1179 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 MPHOSPH6Q99547 160 aaKnown RBP8.3□□□□□ -1.08
VPS26B-204ENST00000527586 SFXN1Q9H9B4 322 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
VPS26B-204ENST00000527586 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
VPS26B-204ENST00000527586 LRFN2Q9ULH4 789 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 APC2O95996 2303 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 ACACAQ13085 2346 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 CREBBPQ92793 2442 aa8.3□□□□□ -1.08
VPS26B-204ENST00000527586 PTPDC1A2A3K4 754 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 FAM221BA6H8Z2 402 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 IGSF3O75054 1194 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 IDH1O75874 414 aaKnown RBP8.29□□□□□ -1.08
VPS26B-204ENST00000527586 WISP1O95388 367 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 EDNRBP24530 442 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 CALML3P27482 149 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 FGD1P98174 961 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 KRT17Q04695 432 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 TCEAL6Q6IPX3 200 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 RSPO2Q6UXX9 243 aaPredicted RBP8.29□□□□□ -1.08
VPS26B-204ENST00000527586 SEPT14Q6ZU15 432 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 TMEM87AQ8NBN3 555 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 DEFB124Q8NES8 71 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 SLC22A17Q8WUG5 538 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 TCEAL3Q969E4 200 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 EDEM2Q9BV94 578 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.29□□□□□ -1.08
VPS26B-204ENST00000527586 USP26Q9BXU7 913 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
VPS26B-204ENST00000527586 NUMBLQ9Y6R0 609 aa8.29□□□□□ -1.08
VPS26B-204ENST00000527586 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 TMEM232C9JQI7 657 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 ANHXE9PGG2 379 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 EPN2O95208 641 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CXCL14O95715 111 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 SMIM10L2AP0DMW4 78 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 SMIM10L2BP0DMW5 78 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 SCG2P13521 617 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 LAG3P18627 525 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 HOXC8P31273 242 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 ZAP70P43403 619 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 ATP8B2P98198 1209 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 FZD5Q13467 585 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 HTR4Q13639 388 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 COLEC12Q5KU26 742 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 TTC39AQ5SRH9 613 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CHCHD4Q8N4Q1 142 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 LSM14AQ8ND56 463 aaKnown RBP8.28□□□□□ -1.08
VPS26B-204ENST00000527586 PPTC7Q8NI37 304 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 STAMQ92783 540 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 NELL2Q99435 816 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 RIOK1Q9BRS2 568 aaKnown RBP8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CRNKL1Q9BZJ0 848 aaKnown RBP8.28□□□□□ -1.08
VPS26B-204ENST00000527586 RNPEPQ9H4A4 650 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CWH43Q9H720 699 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CCPG1Q9ULG6 757 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 MIA3Q5JRA6 1907 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 CACNA1FO60840 1977 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 DENND4AQ7Z401 1863 aa8.28□□□□□ -1.08
VPS26B-204ENST00000527586 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.08
VPS26B-204ENST00000527586 COL12A1Q99715 3063 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 CAPN8A6NHC0 703 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 SHISA7A6NL88 538 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 CAPN9O14815 690 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 BMP3P12645 472 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 PDE4AP27815 886 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 CD52P31358 61 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 CCR3P51677 355 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 CFHR1Q03591 330 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
VPS26B-204ENST00000527586 SLC30A10Q6XR72 485 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 TPRG1Q6ZUI0 275 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 LONP2Q86WA8 852 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 RPAP2Q8IXW5 612 aaPredicted RBP8.27□□□□□ -1.09
VPS26B-204ENST00000527586 MDM1Q8TC05 714 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 SDR42E1Q8WUS8 393 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
VPS26B-204ENST00000527586 LOXL4Q96JB6 756 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms