RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PREX2Q70Z35 1606 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 AFF2P51816 1311 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 MYPNQ86TC9 1320 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 DIP2CQ9Y2E4 1556 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 MAGEA13PA6NCF6 341 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 H3BQV1 296 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CETN3O15182 167 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CYTH3O43739 400 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ORC4O43929 436 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ZBED4O75132 1171 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 SUPT3HO75486 399 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 MTRF1O75570 445 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 ALDH1L1O75891 902 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 LMNAP02545 664 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 INHAP05111 366 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 GNAZP19086 355 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 DRD4P21917 467 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 HOXD10P28358 340 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 RXRBP28702 533 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TUBP50607 506 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 SCNN1DP51172 638 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 GUCY2FP51841 1108 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TUBA4AP68366 448 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 PDE4BQ07343 736 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 BCL2A1Q16548 175 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 GSTA3Q16772 222 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 LONRF3Q496Y0 759 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TBC1D10BQ4KMP7 808 aaPredicted RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 CRTC2Q53ET0 693 aaPredicted RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 AGBL2Q5U5Z8 902 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ADALQ6DHV7 355 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 GRAMD4Q6IC98 578 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 ZNF662Q6ZS27 426 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 C3orf62Q6ZUJ4 267 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CPLX4Q7Z7G2 160 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TBC1D1Q86TI0 1168 aaPredicted RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 TXNDC2Q86VQ3 553 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CNGA4Q8IV77 575 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.33□□□□□ -1.4
CD44-225ENST00000527326 SH2D3CQ8N5H7 860 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 RNF10Q8N5U6 811 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 GALNT6Q8NCL4 622 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 DQX1Q8TE96 717 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 AIDAQ96BJ3 306 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CENPTQ96BT3 561 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 HAUS1Q96CS2 278 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ABHD17AQ96GS6 310 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TUBGCP5Q96RT8 1024 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 MMS19Q96T76 1030 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CENPKQ9BS16 269 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 KRT23Q9C075 422 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 NSRP1Q9H0G5 558 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 RAB17Q9H0T7 212 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 HSD3B7Q9H2F3 369 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 HAUS4Q9H6D7 363 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 SYNCQ9H7C4 482 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 PPANQ9NQ55 473 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 SCHIP1Q9P0W5 487 aaPredicted RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 TUBE1Q9UJT0 475 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 RPL26L1Q9UNX3 145 aaKnown RBP6.33□□□□□ -1.4
CD44-225ENST00000527326 EFR3BQ9Y2G0 817 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 AMOTL2Q9Y2J4 779 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 LRCH1Q9Y2L9 728 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 SPO11Q9Y5K1 396 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 ATP7BP35670 1465 aa6.33□□□□□ -1.4
CD44-225ENST00000527326 CDC42BPGQ6DT37 1551 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 NEURL4Q96JN8 1562 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 MROH7Q68CQ1 1323 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 WDR17Q8IZU2 1322 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 SOWAHDA6NJG2 315 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 SART1O43290 800 aaKnown RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 AKR1B10O60218 316 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ATP2C2O75185 946 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ABL1P00519 1130 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ASLP04424 464 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ITGA2BP08514 1039 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 CCDC159P0C7I6 412 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 BMP4P12644 408 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ATP1A3P13637 1013 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 PORP16435 677 aaPredicted RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 CALB2P22676 271 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 SKIV2L2P42285 1042 aaKnown RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 ME1P48163 572 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 MTHFSP49914 203 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 PEX5P50542 639 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ALDH5A1P51649 535 aaPredicted RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 CLCN2P51788 898 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 GEMIN4P57678 1058 aaKnown RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 HPCAP84074 193 aa6.32□□□□□ -1.4
CD44-225ENST00000527326 PLOD1Q02809 727 aaPredicted RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 CEBPZQ03701 1054 aaKnown RBP6.32□□□□□ -1.4
CD44-225ENST00000527326 MCL1Q07820 350 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms