RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GTF2F1P35269 517 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 GTF2A1P52655 376 aaPredicted RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 HDAC1Q13547 482 aaPredicted RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 BECN1Q14457 450 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 PPP2R5EQ16537 467 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 VASNQ6EMK4 673 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 CYP4F22Q6NT55 531 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 MAMDC4Q6UXC1 1216 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 EXOC8Q8IYI6 725 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 SGSM3Q96HU1 749 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 SPATA32Q96LK8 384 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 EPB41L1Q9H4G0 881 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 MED4Q9NPJ6 270 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 METTL5Q9NRN9 209 aaKnown RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 KCND1Q9NSA2 647 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 CLDND1Q9NY35 253 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 FEZ2Q9UHY8 353 aaPredicted RBP4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 EFR3BQ9Y2G0 817 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 KNSTRNQ9Y448 316 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 PCDHA2Q9Y5H9 948 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 MRVI1Q9Y6F6 885 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 SLC30A1Q9Y6M5 507 aa4.46□□□□□ -1.7
CLNS1A-209ENST00000527299 CUX2O14529 1486 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 ZBTB7CA1YPR0 619 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 KLHL33A6NCF5 533 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 MAFKO60675 156 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 NEFHP12036 1026 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 LCP1P13796 627 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 CBX1P83916 185 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 FAM50AQ14320 339 aaKnown RBP4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 FNDC7Q5VTL7 733 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 ICE2Q659A1 982 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 PCSK4Q6UW60 755 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 EP400NLQ6ZTU2 488 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 POLNQ7Z5Q5 900 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 TRIM48Q8IWZ4 208 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 MYRIPQ8NFW9 859 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 BTN2A2Q8WVV5 523 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 ZG16BQ96DA0 208 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 SHDQ96IW2 340 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 PLEKHG4BQ96PX9 1271 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 TSPAN18Q96SJ8 248 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 STK26Q9P289 416 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 PTPN22Q9Y2R2 807 aa4.45□□□□□ -1.7
CLNS1A-209ENST00000527299 CCDC189A1A4V9 331 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 PPP1R12AO14974 1030 aaPredicted RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 CTAGE5O15320 804 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 PPFIA2O75334 1257 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 FBXO21O94952 628 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 CKMP06732 381 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 ZNF888P0CJ79 500 aaPredicted RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 LTBRP36941 435 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 ECI1P42126 302 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 TDO2P48775 406 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 RBM25P49756 843 aaKnown RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 RAC3P60763 192 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 PAK2Q13177 524 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 DDX10Q13206 875 aaKnown RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 USP10Q14694 798 aaKnown RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 ATP2B3Q16720 1220 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 SKIDA1Q1XH10 827 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 RASGRP4Q8TDF6 673 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 CLEC4DQ8WXI8 215 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 LARP4BQ92615 738 aaKnown RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 CHAMP1Q96JM3 812 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 AGAP2Q99490 1192 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 PAIP2Q9BPZ3 127 aaKnown RBP4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 CDIP1Q9H305 208 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 OGFRQ9NZT2 677 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 ZFP69BQ9UJL9 534 aa4.44□□□□□ -1.7
CLNS1A-209ENST00000527299 KRIT1O00522 736 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 TBX1O43435 398 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 DHX16O60231 1041 aaKnown RBP4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 COQ9O75208 318 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 CPP00450 1065 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 SNRPB2P08579 225 aaKnown RBP4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 CR2P20023 1033 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 ACRV1P26436 265 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 TNNT3P45378 269 aaPredicted RBP4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 HMGN5P82970 282 aaKnown RBP4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 TRDNQ13061 729 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 DUSP8Q13202 625 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 TUBA3CQ13748 450 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 MYBPC2Q14324 1141 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 ZNF568Q3ZCX4 644 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 RPAINQ86UA6 219 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 PPIL6Q8IXY8 311 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 FAM177A1Q8N128 213 aaPredicted RBP4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 STPG3Q8N7X2 389 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 PPP1R14AQ96A00 147 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 VOPP1Q96AW1 172 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 FAM89AQ96GI7 184 aa4.43□□□□□ -1.7
CLNS1A-209ENST00000527299 CCDC140Q96MF4 163 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms