RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 EML1O00423 815 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 BACH1O14867 736 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 STBD1O95210 358 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 FGBP02675 491 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 SFNP31947 248 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
CTSB-214ENST00000527243 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTSB-214ENST00000527243 UGCGQ16739 394 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 TCTN1Q2MV58 587 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 TAF2Q6P1X5 1199 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 OSBPL7Q9BZF2 842 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 GABBR1Q9UBS5 961 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 COL1A2P08123 1366 aa12.65□□□□□ -0.38
CTSB-214ENST00000527243 GJB2P29033 226 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 THPOP40225 353 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
CTSB-214ENST00000527243 MGAT3Q09327 533 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
CTSB-214ENST00000527243 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 DEFB128Q7Z7B8 93 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 NOSTRINQ8IVI9 506 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
CTSB-214ENST00000527243 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
CTSB-214ENST00000527243 MTMR9Q96QG7 549 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 PCDHA2Q9Y5H9 948 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
CTSB-214ENST00000527243 RSPH10B2B2RC85 870 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 CHMP2AO43633 222 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 CHRNA1P02708 482 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 RSPH10BP0C881 870 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
CTSB-214ENST00000527243 TARBP2Q15633 366 aaKnown RBP12.63□□□□□ -0.39
CTSB-214ENST00000527243 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 LINC01465Q8N7H1 131 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 FAM167AQ96KS9 214 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 CEP89Q96ST8 783 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
CTSB-214ENST00000527243 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.62□□□□□ -0.39
CTSB-214ENST00000527243 SMIM35A0A1B0GVV1 85 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.62□□□□□ -0.39
CTSB-214ENST00000527243 NEMFO60524 1076 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 C22orf31O95567 290 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 OATP04181 439 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 RPLP2P05387 115 aaKnown RBP12.62□□□□□ -0.39
CTSB-214ENST00000527243 KLRC1P26715 233 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
CTSB-214ENST00000527243 IGBP1P78318 339 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 PRKCEQ02156 737 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 PLEKHG4Q58EX7 1191 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 C4orf32Q8N8J7 132 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 DNAJB3Q8WWF6 145 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
CTSB-214ENST00000527243 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
CTSB-214ENST00000527243 BAIAP3O94812 1187 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 CTSHP09668 335 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 EPHA7Q15375 998 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 CALCRLQ16602 461 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 CNKSR3Q6P9H4 555 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
CTSB-214ENST00000527243 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
CTSB-214ENST00000527243 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
CTSB-214ENST00000527243 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
CTSB-214ENST00000527243 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
CTSB-214ENST00000527243 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 SLC34A2O95436 690 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 ACTN1P12814 892 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 MCM7P33993 719 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 PSMC5P62195 406 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 MRPS6P82932 125 aaKnown RBP12.6□□□□□ -0.39
CTSB-214ENST00000527243 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 TTC38Q5R3I4 469 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 ANO5Q75V66 913 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 RSPH3Q86UC2 560 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 CKAP2LQ8IYA6 745 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 NME8Q8N427 588 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 DBF4BQ8NFT6 615 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
CTSB-214ENST00000527243 HSD17B14Q9BPX1 270 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 FTOQ9C0B1 505 aaKnown RBP eCLIP12.6□□□□□ -0.393e-19■□□□□ 9.3
CTSB-214ENST00000527243 FAM49AQ9H0Q0 323 aaPredicted RBP12.6□□□□□ -0.39
CTSB-214ENST00000527243 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
CTSB-214ENST00000527243 NRBP2Q9NSY0 501 aa12.6□□□□□ -0.39
CTSB-214ENST00000527243 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms