RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
CTSB-213ENST00000527215 TJAP1Q5JTD0 557 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 SWSAP1Q6NVH7 229 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 SMAP1Q8IYB5 467 aaPredicted RBP18.24■□□□□ 0.51
CTSB-213ENST00000527215 GTF3C6Q969F1 213 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 PHF20Q9BVI0 1012 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 GJB4Q9NTQ9 266 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
CTSB-213ENST00000527215 TDP2O95551 362 aa18.23■□□□□ 0.51
CTSB-213ENST00000527215 TAP1Q03518 808 aa18.23■□□□□ 0.51
CTSB-213ENST00000527215 NONOQ15233 471 aaKnown RBP eCLIP18.23■□□□□ 0.512e-11■■■■■ 33.7
CTSB-213ENST00000527215 PDXDC2PQ6P474 469 aa18.23■□□□□ 0.51
CTSB-213ENST00000527215 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
CTSB-213ENST00000527215 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
CTSB-213ENST00000527215 ORC3Q9UBD5 711 aaPredicted RBP18.23■□□□□ 0.51
CTSB-213ENST00000527215 REV3LO60673 3130 aa18.23■□□□□ 0.51
CTSB-213ENST00000527215 RALGAPA2Q2PPJ7 1873 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 HBP1O60381 514 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 GJB5O95377 273 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 AMHP03971 560 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 PSAPP07602 524 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 GHRP10912 638 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 XBP1P17861 261 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 ATP4AP20648 1035 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 MRPS6P82932 125 aaKnown RBP18.22■□□□□ 0.51
CTSB-213ENST00000527215 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 INF2Q27J81 1249 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 FAM117BQ6P1L5 589 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 KRT25Q7Z3Z0 450 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 ATP8B4Q8TF62 1192 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 APBB2Q92870 758 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 SLC5A5Q92911 643 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 GJA10Q969M2 543 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
CTSB-213ENST00000527215 CERS4Q9HA82 394 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 PCDHA2Q9Y5H9 948 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 PCDHA10Q9Y5I2 948 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 MAFBQ9Y5Q3 323 aaPredicted RBP18.22■□□□□ 0.51
CTSB-213ENST00000527215 CDY2AQ9Y6F7 541 aa18.22■□□□□ 0.51
CTSB-213ENST00000527215 COL1A2P08123 1366 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 GAS7O60861 476 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 RPLP2P05387 115 aaKnown RBP18.21■□□□□ 0.51
CTSB-213ENST00000527215 FDPSP14324 419 aaKnown RBP18.21■□□□□ 0.51
CTSB-213ENST00000527215 IGFBP4P22692 258 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 LPIN1Q14693 890 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 Q4G0T1 1027 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 LRCH2Q5VUJ6 765 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 MTHFD1LQ6UB35 978 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 WASF1Q92558 559 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 RIT2Q99578 217 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 TEKT3Q9BXF9 490 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 GABBR1Q9UBS5 961 aa18.21■□□□□ 0.51
CTSB-213ENST00000527215 CYP3A7-CYP3A51PA0A087WV96 503 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 CCDC194A0A1B0GVG4 234 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 WDR64B1ANS9 1081 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 CHMP2AO43633 222 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 CYP3A7P24462 503 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 KLRC1P26715 233 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 TMEM62Q0P6H9 643 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 ZNF484Q5JVG2 852 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 IER5Q5VY09 327 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 MOXD1Q6UVY6 613 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 TRMT1LQ7Z2T5 733 aaKnown RBP18.2■□□□□ 0.5
CTSB-213ENST00000527215 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 NSUN7Q8NE18 718 aaKnown RBP18.2■□□□□ 0.5
CTSB-213ENST00000527215 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
CTSB-213ENST00000527215 MBOAT7Q96N66 472 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 RAD9AQ99638 391 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
CTSB-213ENST00000527215 UNC45AQ9H3U1 944 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 DISC1Q9NRI5 854 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 IGSF9BQ9UPX0 1349 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 TTC3P53804 2025 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
CTSB-213ENST00000527215 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 SMIM35A0A1B0GVV1 85 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.19■□□□□ 0.5
CTSB-213ENST00000527215 EPOPA6NHQ4 379 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 ZBTB42B2RXF5 422 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 M0QZ92 97 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 RFXAPO00287 272 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
CTSB-213ENST00000527215 ARNTL2Q8WYA1 636 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 TRPV2Q9Y5S1 764 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 ARID2Q68CP9 1835 aa18.19■□□□□ 0.5
CTSB-213ENST00000527215 JAK2O60674 1132 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 PSMD10O75832 226 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 SFNP31947 248 aa18.18■□□□□ 0.5
CTSB-213ENST00000527215 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms