RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 CASP14P31944 242 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 TBC1D8BQ0IIM8 1120 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 FKBP15Q5T1M5 1219 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 LRRC55Q6ZSA7 311 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 IWS1Q96ST2 819 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 TRMT1Q9NXH9 659 aaKnown RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 BTBD7Q9P203 1132 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 MFAP3LO75121 409 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 GNPTABQ3T906 1256 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 E4F1Q66K89 784 aaPredicted RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 TMEM139Q8IV31 216 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 MYCT1Q8N699 235 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 DNERQ8NFT8 737 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 CEP63Q96MT8 703 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 SPATC1LQ9H0A9 340 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 ASCC2Q9H1I8 757 aaPredicted RBP17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 KCTD10Q9H3F6 313 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 OLFML3Q9NRN5 406 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 ODF2LQ9ULJ1 636 aa17.91■□□□□ 0.46
SNRNP35-204ENST00000527158 GNA14O95837 355 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 RDM1Q8NG50 284 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 ARID3AQ99856 593 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 SEL1LQ9UBV2 794 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 SCN4AP35499 1836 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 LYPLA2O95372 231 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 CASP5P51878 434 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 HERVK_113P62684 666 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 CBX1P83916 185 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 KNOP1Q1ED39 458 aaKnown RBP17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 EDRF1Q3B7T1 1238 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 ZNF746Q6NUN9 644 aaPredicted RBP17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 EPM2AIP1Q7L775 607 aaPredicted RBP17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
SNRNP35-204ENST00000527158 PTPRFP10586 1907 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 GCNT3O95395 438 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 OSBPP22059 807 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 GUCY2CP25092 1073 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 FXR1P51114 621 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 PSMC5P62195 406 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 MAN2A1Q16706 1144 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 MIIPQ5JXC2 388 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 NCAPG2Q86XI2 1143 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 PPP1R13BQ96KQ4 1090 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 PAGR1Q9BTK6 254 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 NUP58Q9BVL2 599 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 SFI1A8K8P3 1242 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 MYBP10242 640 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 STXBP2Q15833 593 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 BMT2Q1RMZ1 405 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 CCDC40Q4G0X9 1142 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 LDLRAD1Q5T700 205 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 PADI6Q6TGC4 694 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 C4orf19Q8IY42 314 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 SLC10A4Q96EP9 437 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 SENP7Q9BQF6 1050 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 NDST4Q9H3R1 872 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 POLD4Q9HCU8 107 aa17.89■□□□□ 0.45
SNRNP35-204ENST00000527158 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 CETN3O15182 167 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 ZSCAN12O43309 604 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 CCNE2O96020 404 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 ZSCAN20P17040 1043 aaPredicted RBP17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 ADAM9Q13443 819 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 STXBP4Q6ZWJ1 553 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 RETREG2Q8NC44 543 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 PCMTD1Q96MG8 357 aaPredicted RBP17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 MOV10L1Q9BXT6 1211 aaKnown RBP17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 DDX41Q9UJV9 622 aaKnown RBP17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 TRAF3IP3Q9Y228 551 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 PCDHA10Q9Y5I2 948 aa17.88■□□□□ 0.45
SNRNP35-204ENST00000527158 PDXKO00764 312 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 EIF3JO75822 258 aaKnown RBP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 PRPF6O94906 941 aaKnown RBP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 SLC25A27O95847 323 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 YWHABP31946 246 aaKnown RBP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ZNF131P52739 623 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 NFASCO94856 1347 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 PHLPP2Q6ZVD8 1323 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 GOLGA6L9A6NEM1 432 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 UNCXA6NJT0 531 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 SPATA31C2B4DYI2 1134 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 PEX10O60683 326 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 RGS20O76081 388 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 KCNA2P16389 499 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 KRT9P35527 623 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 COPB2P35606 906 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 SNAPC2Q13487 334 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ODR4Q5SWX8 454 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms